Gene RPD_3875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3875 
Symbol 
ID4024391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4314572 
End bp4315438 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content65% 
IMG OID637964079 
Productprolipoprotein diacylglyceryl transferase 
Protein accessionYP_570997 
Protein GI91978338 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0682] Prolipoprotein diacylglyceryltransferase 
TIGRFAM ID[TIGR00544] prolipoprotein diacylglyceryl transferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.102914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTGT TCGCCATCGC CTTTCCTGTG TTCGACCCGG TGGCAGTCGC CATCGGACCA 
TTCGTGATCC GCTGGTACGC GCTGGCCTAT ATCGGCGGCA TCCTGCTCGG CTGGCTTTAT
GCCCGGATGC TGCTGCAGCG TGAGCAGCTC TGGGGCGGCC CGGCGCCGGT CACCCCCGTC
CAGTTCGACG ATTTCATCCT GTGGGTGACG ATCGGCATCA TTCTCGGCGG CCGCGCCGGC
TATGTGCTGT TCTACAATCT CGACTTTTTC ATCGCCCATC CGGCCGAGAT TTTCGAGCTG
TGGAAAGGCG GGATGTCGTT CCACGGCGGC TTCATGGGCT GCGTGGTCGC GGTGTTCCTG
TTCGGATGGA AGAACAAGGT TTCGATTGCC TCGCTCGGCG ACATCACCTG CGCGGTGGGG
CCGATCGGCC TGTTCCTCGG CCGCATCGCC AATTTCATCA ACGGCGAATT GTGGGGCCGC
CCGGCGGATT CCAGCGTGCC ATGGGCGATG GCGTTTCCGA ATGCCGGGCC GCTGCCGCGG
CACCCTAGCC AGCTCTACGA AGCAGGCCTC GAAGGCCTGG CATTGTTCGT CATCCTGGCG
GTGATGATCC GCGCCGGCGC GCTGAAGCGT CCCGGCGTGA TCATCGGCGC GTTCCTCGCC
TTCTACGGGC TGGCGCGCAT CACCAGCGAG TTCTTCCGCG AGCCCGATCC TCAGCTCGGC
TTCCTGTGGG GCGGCATGAC GATGGGCATG TTGCTGTCAG TGCCGATGGT GATTGCCGGC
ATCATCGTGA TGCTGTGGGC GCGACGACGC GCGGTCGCCC CGCAGCCATC CGGCGCGAGC
ACGAAACCCG GCGAGGCGCT CAAGTGA
 
Protein sequence
MSLFAIAFPV FDPVAVAIGP FVIRWYALAY IGGILLGWLY ARMLLQREQL WGGPAPVTPV 
QFDDFILWVT IGIILGGRAG YVLFYNLDFF IAHPAEIFEL WKGGMSFHGG FMGCVVAVFL
FGWKNKVSIA SLGDITCAVG PIGLFLGRIA NFINGELWGR PADSSVPWAM AFPNAGPLPR
HPSQLYEAGL EGLALFVILA VMIRAGALKR PGVIIGAFLA FYGLARITSE FFREPDPQLG
FLWGGMTMGM LLSVPMVIAG IIVMLWARRR AVAPQPSGAS TKPGEALK