| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3855 |
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| Symbol | |
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| ID | 4024371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4293706 |
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| End bp | 4295724 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964059 |
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| Product | hydrogenase 4 subunit B |
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| Protein accession | YP_570977 |
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| Protein GI | 91978318 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC TCGCGGTCCA GCTGTGGTGT GTCGCCGCGC TGCTTGCGGC TGCGGTCGTC
GCGGTTCCAC TGAGTCGCTG GCCCGGCCTC TCCACCGCCA TCATCTACAG CGCGACGCTG
ATGGCCTGCG CCATCGCGAC TGCGAGCGCG CTCACCTGGC TGCTCCTGCA TGCCGATGCC
GCCGCCGAGC GCACGCTGCC GATCGGGCTG CCATGGCTCG GCGCGCATCT GCGGCTCGAT
GCGCTGGCGG CGTTCTTCCT GGTCGTCGTC AATCTCGGCG GCGCGCTCGC GAGCCTTTAT
GCGCTGGGCT ACGGCCGCCA CGAACGGGCG CCGCATCGCG TGCTGCCGTT CTATCCGGCA
TTTCTCGCCG GGATGAATCT GGTCGTGCTG GCCGCCGATG CGTTCTCTTA TCTTTTGAGC
TGGGAGTTCA TGTCGCTGGC GTCGTGGGCG CTGGTGATGG CGCATCATCG CGACGGCGGC
AATCGCCGCG CCGGATACGT CTATCTGGTG ATGGCGAGCT TCGGCACGCT GGCGCTGCTG
CTCGCCTTCG GCCTGCTTGC GGGCACCGCC GGAGACTATG ATTTCGCGTC GATCCGGATC
GCTCCGCACT CGCCTTACGT CGCCACGCTT GTGCTGATCC TGATGTTGCT CGGCGCTGGC
TCCAAGGCCG GTCTGGTGCC CCTCCATGTC TGGCTGCCGC TGGCGCATCC GGCGGCGCCG
AGCCACGTCT CGGCGCTGAT GAGCGGCGTG ATGACCAAGG TGGCAATCTA CGGCTTCATC
CGCGTGGTGT TCGATCTGCT CGGGCAACCG GACTGGTCGA CGAGCGGCAT CGTGCTGGCG
CTCGGCGGCA TCACCGCGGC GCTCGGCATT CTCTACGCGC TGATGGAGAA GGACCTGAAG
CGGCTGCTCG CCTACTCGAC GATCGAGAAT GTCGGCATCG TGTTCGTCAG TCTCGGCCTG
GCTCTGGCGT TTCAGGCCAA TGACGACAAG GTGCCGGCGG CGCTGGCGTT CACCGCGGCG
CTGTTTCACA TCTTCAACCA TTCGCTGTTC AAGAGCCTGC TGTTCTTCGG TGCCGGCGCG
GTACTGAGTG CGACCGGGGA GCGCGACATG GACAGACTCG GCGGGCTGAT CCATCGTATG
CCGTTCACCA GCGTGGTGTT CCTGGTCGGC TGCGTCGCGA TTTCGGCGCT GCCCCCGTTC
AACGGCTTTG TTTCGGAATG GCTGATCTTC CAGGCGGTGC TGCAGAGCCC GCAATTGCCG
CAATGGGGCC TGAAGATCCT TGTGCCGGCG GTCGGCGGGC TGATGGCGCT GGCCGCCGCG
CTGGCGGCGG CGTGTTTCGT CAAGGCCTAT GGCGTCACCT TTCTCGGCCG GCCGCGCGGC
GCAGCGACGA TTGCCGCGAA AGAGGTCGAT CGTTTCTCGC TCGCCGCGAT GGCGATCCTC
GCCGCGTTGT GCCTGCTCGC CGGCGTTTTG CCCGGCGTGG TGATGGATGC TCTGGCTCCG
ATCGCAACCA ACATCCTCGG CAGCCGGCTG GCGCCGCAAA GCGGAATGGC GTGGCTCTCG
ATCGTGCCGA TCTCGGGAAA TCACAGTTCC TATAACGGTC TTCTGGTGGC GATGTTCATT
GCGCTGTCGG CGTTGCTGCT GTTCGTCGCG ATCCGGATGT TCTCGTCGGG TGCAGTGCGC
CGCGGACCGG CCTGGGGCTG CGGTTTCACC GATCCGGCCC CGCTCGCTCA ATATTCCGCG
GACGGGTTCG CGCAGCCGAT CCGTCGCGTG TTCGGAACGC TGATCTTCCG CGCCCGCGAT
CACGTCACCA TGCCGCCGCC GGGCGACACA GCGCCGGCGC GGCTCACCAT CGAACTGCAC
GATCAAATCT GGGAACGGAT CTACGCGCCG CTCGCCGGCG GCATCATGAT CGCCTCGGCA
CGTCTCGACA GGCTGCAGCT TCTCACGATC CGTGGTTATC TCAGCCTCGT CTTCGTCACC
CTTGTCACCC TGCTGCTGGT GCTCGCGATA TGGACGTGA
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| Protein sequence | MTELAVQLWC VAALLAAAVV AVPLSRWPGL STAIIYSATL MACAIATASA LTWLLLHADA
AAERTLPIGL PWLGAHLRLD ALAAFFLVVV NLGGALASLY ALGYGRHERA PHRVLPFYPA
FLAGMNLVVL AADAFSYLLS WEFMSLASWA LVMAHHRDGG NRRAGYVYLV MASFGTLALL
LAFGLLAGTA GDYDFASIRI APHSPYVATL VLILMLLGAG SKAGLVPLHV WLPLAHPAAP
SHVSALMSGV MTKVAIYGFI RVVFDLLGQP DWSTSGIVLA LGGITAALGI LYALMEKDLK
RLLAYSTIEN VGIVFVSLGL ALAFQANDDK VPAALAFTAA LFHIFNHSLF KSLLFFGAGA
VLSATGERDM DRLGGLIHRM PFTSVVFLVG CVAISALPPF NGFVSEWLIF QAVLQSPQLP
QWGLKILVPA VGGLMALAAA LAAACFVKAY GVTFLGRPRG AATIAAKEVD RFSLAAMAIL
AALCLLAGVL PGVVMDALAP IATNILGSRL APQSGMAWLS IVPISGNHSS YNGLLVAMFI
ALSALLLFVA IRMFSSGAVR RGPAWGCGFT DPAPLAQYSA DGFAQPIRRV FGTLIFRARD
HVTMPPPGDT APARLTIELH DQIWERIYAP LAGGIMIASA RLDRLQLLTI RGYLSLVFVT
LVTLLLVLAI WT
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