Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3853 |
Symbol | |
ID | 4024369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4292094 |
End bp | 4292756 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637964057 |
Product | hypothetical protein |
Protein accession | YP_570975 |
Protein GI | 91978316 |
COG category | [C] Energy production and conversion |
COG ID | [COG4237] Hydrogenase 4 membrane component (E) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.395736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGGTC TCGCCTTCGA CATTTCGCAT TCGCTGGCCG GCGGTTTGGT GCTGGTATCG TTCATGATGC TGTATCAGGA CCGGCTGACT TCGCTGCTCA ACGTGTTTGC GCTGCATGCG GTCATGCTGT CGCTGGCGGT GGGATGGCAG GCGCTGATCC AGGACGCGCC GCATCTCTAC GTCACCGCGC TGATCGCGCT GCTGTTCAAG GCGATCATCA TTCCGGTCGC GCTGCGCCGC ATCGTCTACA AGCTCGGCAT CCACCGCGAC ATCGAGACCG TGGTGGGGAT CGGCCCGACC ATGCTGGCCG GGATGGGGCT GGTGGCGCTG TCGCTGGCGC TGATGCTGCG TGTCACCGCC GACGCTGATG CGCTGGCGCG CGAGGATCTT GCGTTTGCGC TCTCCGTCGT ACTGCTCGGC CTGCTGTTCA TGGTGACGCG GCGCAACGCG GTCAGCCAGG TCATCGGCTT CATGTCGCTG GAAAACGGGT TGATCCTGGC TGCTGCCGGC GCCAAGGGCA TGCCGCTGGT GGTCGAGATC AGCGTCGCCT TCTCGGTGCT GATTGCGTTC ATCGTCATCG GCATCGTGCT GTTCCGGATC CGCGAACGGT TCGACTCGGT CGACGTTTCG CAGCTCGACG TCTCGCGTGG GGAGCAGCGA TGA
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Protein sequence | MHGLAFDISH SLAGGLVLVS FMMLYQDRLT SLLNVFALHA VMLSLAVGWQ ALIQDAPHLY VTALIALLFK AIIIPVALRR IVYKLGIHRD IETVVGIGPT MLAGMGLVAL SLALMLRVTA DADALAREDL AFALSVVLLG LLFMVTRRNA VSQVIGFMSL ENGLILAAAG AKGMPLVVEI SVAFSVLIAF IVIGIVLFRI RERFDSVDVS QLDVSRGEQR
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