Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3852 |
Symbol | |
ID | 4024368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4290646 |
End bp | 4292097 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637964056 |
Product | hydrogenase 4 subunit F |
Protein accession | YP_570974 |
Protein GI | 91978315 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0294681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTGT CCGGCCTCGA TCCGGTGGTG GGCGTGCTGC TGATTCCGGT CTGCGCCGCC GCGGTGCTTG CGGTGCTGCC GGGTTACAAA CTCACAGCGC AGCTCAACGT GCTGGCAAGC CTCGGCAGCC TGGTCTGCGC CGCCTCGCTG CTGGTGCTGC CGCGCCCGGC GCCGGGTCCT TACATCCTGG TCGACGATCT CAACATCGTC TTCATCGTGC TCAACACCTT CGTCGGCTTC ACCACCAGCC TGTTCAGCGC CAGCTACATC GCCCACGAGC TCGAGACCGG CAAGCTGACG CCGACCTATC TGCGGTTCTA CCACGCGATG TATCAGATCA TGATGTTCGG CATGAATCTG GCGTTCGTGT CCAACAATAT CGGCCTGATG TGGGTCGCGG TCGAGCTGGC GACGCTGACC ACGGTGTTGA TGGTCGGCAT CTATCGCACG CCGGCGGCGC TGGAAGCGGC GTGGAAATAC TTCATCCTCG GCAGCGTCGG TATCGCGCTG GCGCTGTTCG GCACCATCCT GGTCTACATG GCGGCGCGGC CGGTGGTCGG CGAAGGGCAG GACGGCATGA TCTGGACCGT GCTGGTGTCG CGCGCCGCCG GCTTCGACGC GCCGCTGTTG AACGTCGCCT TCGTGTTCCT GTTCCTCGGC TACGGCACCA AGGTCGGCCT TGCGCCGCTG CACGCCTGGC TGCCGGACGC CCACGCCGAG GGTCCGACGC CGATCTCGGC GGTGCTGTCG GGCCTGTTGC TCAACGTTGC GTTGTACGCG TTGCTGCGCT TCAAGGTGCT GCTCGCCGCC AATGCCGAAA CCATGCCGCC CGGGATTCTG ATGATCGTGA TGGGGCTGGC GTCGCTGCTG TTCGCCGCCT TCATGCTGTA TCGGCGGCGC GACATCAAAC GGCTGTTCGC CTATTCGTCG ATCGAGCACA TGGGCATCAT CGTGTTCGCC TTCGGCATGG GCGGGCCATT GGCGAATTTT GCGGGCCTGC TGCACATGGT GATGCACAGT CTGACCAAGT CGGCGATCTT CTATGCGGTC GGCCACATCA CCCAAGTCAA GGGAACGCAG TCGTTGTCGA AGATTCGCGG CATCACCGAG TCCCATCCGG TGCTCGGCTG GGGCCTGGTC GTCGGCGTGG TGGCGATCGC GGGCCTGCCG CCGCTCGGCA TCTTCATGAG CGAGTTCCTG CTGGTATCCT CGACCTTCGC GCGCTCGCCG TTGCTGGCTT TGCTACTGGT GTTTGGATTG CTTGTCGCGT TCGGCGCGCT GATGCTGCGG CTGACCGGCA TCGCCTTCGG CGAGCCGCGC GGCAGCCGTG AACCCGTGCA GGCGTCCTAC GTGCCGATGT TCGCGCATCT CGCCTTGGTG TTGATTGCCG GCGTCTATCT GCCGGCGCCG GTGGTGGCGT GGTTCCAGCA CGTCGCCAAG CTACTGGGCT AG
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Protein sequence | MNLSGLDPVV GVLLIPVCAA AVLAVLPGYK LTAQLNVLAS LGSLVCAASL LVLPRPAPGP YILVDDLNIV FIVLNTFVGF TTSLFSASYI AHELETGKLT PTYLRFYHAM YQIMMFGMNL AFVSNNIGLM WVAVELATLT TVLMVGIYRT PAALEAAWKY FILGSVGIAL ALFGTILVYM AARPVVGEGQ DGMIWTVLVS RAAGFDAPLL NVAFVFLFLG YGTKVGLAPL HAWLPDAHAE GPTPISAVLS GLLLNVALYA LLRFKVLLAA NAETMPPGIL MIVMGLASLL FAAFMLYRRR DIKRLFAYSS IEHMGIIVFA FGMGGPLANF AGLLHMVMHS LTKSAIFYAV GHITQVKGTQ SLSKIRGITE SHPVLGWGLV VGVVAIAGLP PLGIFMSEFL LVSSTFARSP LLALLLVFGL LVAFGALMLR LTGIAFGEPR GSREPVQASY VPMFAHLALV LIAGVYLPAP VVAWFQHVAK LLG
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