| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3851 |
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| Symbol | |
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| ID | 4024367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4289118 |
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| End bp | 4290629 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637964055 |
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| Product | NADH-ubiquinone oxidoreductase, chain 49kDa |
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| Protein accession | YP_570973 |
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| Protein GI | 91978314 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3261] Ni,Fe-hydrogenase III large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.425582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCGC TGATCGATCT CAATCTCGAA GGCCTGCAGG TGGCGCGGCA TCGGCCGTGG
TCCCGCACGG TTGTCGACAG CGCGGTGTGG AGCTTCGCGG CCAAGATGCT GAGCGAGCAG
CAGTGGCAGT TGCTCTCGCT GTGGGGGGAG CCGGCGATCG TGCACATGGC GCTGTTCGAT
CCTCGCACCG CCGAGATCGG CGTCGTCAGC CTCGACTGCC CGCATCGCAG TTTCCCCTCG
GTCGCAGCCA AGCATCTGCC GGCGTTGCGG CTCGAGCGCA CCATTCGCGA TCTCTACGGG
CTCGTCCCTG AGGGCGCGAT TGACGACCGG CCCTGGCTGG ATCACGGCCA ATGGGGCGTG
CACGCGCCGC TCGGTGAGCC TGTCGAATTC CTGGCGCCGT CGCCGTCCTA TCGCTTCCTG
CCAGTCGAAG GCGAGGGCGC GCATCAGGTC GCGGTCGGCC CGGTCCATGC CGGCATCATC
GAGCCCGGCC ATTTCCGGTT CACCGTCTCC GGCGAGACCG TGGTGCGGCT GGAGCAGCGG
CTCGGCTATG TGCACAAGGG CATCGACGGG CTGCTCGCCG GCGCGGAATT GTCGCGCGCC
GCGCGGCTCG CCGGCCGCGT CTCCGGCGAC AGCACGGTGG CCTATGCGCT GGCGTTTGCG
CGCGCCGTCG AGGCCGCGGC CGAGATCGCG GCGCCGGCGC GCGCGGTGTG GCTACGCGCG
CTGGTCGCCG AGCTCGAACG CCTCGCCAAT CATCTCGGCG ACATCGGCGC GATCTGCAAC
GACGCGGCAT TCGCGCTCAT GCTGGCGCAG TTCGGCGTGC TGCGCGAAAA CGTGCTGCGC
GCCGCGGACG CCGCCTTCGG CCATCGTCTG ATGCGCGACG TGGTGACGCC GGGCGGCGTG
ACGCGCGATC TCGACGCGAC CGGAACGGCA GCGATCCGCA AGGCGCTGGC CGCTGTGCAC
AACAAGCTGC CGGAACTGAT CGAACTTTAC GACCGCACGG CGTCGCTGCA GGACCGCACC
GTCGGGACCG GGATTCTCAA GGCGTCGCTG GCCGATCAAT ATGCCGCCGG CGGCTTTGTC
GGCCGCGCCT CCGGTCGCGC CTTCGATGCA CGGCGCACGC TGGGCTACGC CCCTTATGAC
GAGTTGCGCT TCGAAATCCC GGTGCGGACC GAGGGCGACG TCGACGCGCG CATCTGGATT
CGCATCAGCG AGGTCGAGCA GAGCCTCGCG CTGGTCGACC AGATTCTCGA TCGCCTGCCG
GGCGGCGATA TTTGCGTCGC CCCGGCGCTG CCGGAGCAGG TCTGCGAGGG CCTGGCGCTG
GTCGAGGGTT TTCGCGGCGA CATTCTGGTG TGGCTGCGAT TGCGTGACGG AGTCGTCGAG
CGCTGCCACC TGCGCGATCC GTCCTGGTTT CAATGGCCGC TGCTGGAAGC CGTGATCGAG
GGCAATATCA TCGCCGACTT CCCGCTGTGC AACAAATCGT TCAACTGCTC TTATTCCGGC
GTGGATCTGT AG
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| Protein sequence | MPSLIDLNLE GLQVARHRPW SRTVVDSAVW SFAAKMLSEQ QWQLLSLWGE PAIVHMALFD
PRTAEIGVVS LDCPHRSFPS VAAKHLPALR LERTIRDLYG LVPEGAIDDR PWLDHGQWGV
HAPLGEPVEF LAPSPSYRFL PVEGEGAHQV AVGPVHAGII EPGHFRFTVS GETVVRLEQR
LGYVHKGIDG LLAGAELSRA ARLAGRVSGD STVAYALAFA RAVEAAAEIA APARAVWLRA
LVAELERLAN HLGDIGAICN DAAFALMLAQ FGVLRENVLR AADAAFGHRL MRDVVTPGGV
TRDLDATGTA AIRKALAAVH NKLPELIELY DRTASLQDRT VGTGILKASL ADQYAAGGFV
GRASGRAFDA RRTLGYAPYD ELRFEIPVRT EGDVDARIWI RISEVEQSLA LVDQILDRLP
GGDICVAPAL PEQVCEGLAL VEGFRGDILV WLRLRDGVVE RCHLRDPSWF QWPLLEAVIE
GNIIADFPLC NKSFNCSYSG VDL
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