Gene RPD_3839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3839 
Symbol 
ID4024355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4277761 
End bp4278030 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content65% 
IMG OID637964043 
Producthypothetical protein 
Protein accessionYP_570961 
Protein GI91978302 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00356032 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA GAACGCGCCG CGAAACGATC GTCTTCCACC AACCCTTCCG GCTGCGCGGC 
ATCGACCGCG AACTGCCGGC CGGTGCTTAT GACGTCGTCA CCGACGAAGA ACTCATCGAA
GGCCTGTCGT TCCCGGTGTT CCGGCGCGTC GCGACGATGA TTACCCTGCC CTGCGCGCCG
CCGCATCAGA ACGCGATCGA AATGGTCGCG ATCGACCCCG AAACCGTTCG CGACGCGCGT
CAAGCCGACG CCAGCGCCAA CCAGCCGTAA
 
Protein sequence
MTTRTRRETI VFHQPFRLRG IDRELPAGAY DVVTDEELIE GLSFPVFRRV ATMITLPCAP 
PHQNAIEMVA IDPETVRDAR QADASANQP