| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3821 |
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| Symbol | |
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| ID | 4024337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4261010 |
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| End bp | 4261951 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637964025 |
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| Product | phosphonate-binding periplasmic protein |
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| Protein accession | YP_570943 |
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| Protein GI | 91978284 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
[TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.59703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCA ACCGTCGATC CGTTCTTCTT ACCGCCGCCG CGCTGGCCTT CACGGCGTCC
GCCGCGACGG CGCAGGACTA CAAGTCCAAA TATCCGGAGC TGACCTTTGC GGTCGTGCCG
GCCGAGAATG CTTCGGGTGT GACGGAACGA TGGTCACCTT TCGTCGCCTA CCTGTCGAAG
GAACTCGGCG TGAAGGTCAA TCTGCGGATC GCCAATGACT ACGCTGCCGT GATCGAGGGC
CAGCGCGCCG GCAATATCCA GCTTGCCAGC TACGGCTCGG CGTCCTTCGC CCGAGCCCGG
CTGACCGGCG TCAAGACCGA AGCCTTCGCC AACGACATCA ACAAGGACGG TTCGACCGGC
TACTATTCGG TGTTTTTCGT CAAGGCGAGC AGCCCGTACA AGAGCATCGA CGAGATGAAG
GGCAAGAACC TCGGTCTGGT CGATCCGAAT TCGACCTCCG GCAACAACGT GCCGCGGTTC
GAGCTCGACA AGATGGGCAT CTCCGATGCC GAGGGCTATT TCGGCAAGGT CGTCTTCACC
GGCAGCCACG AAAACGCAAT CCTGGCGCTG GCGCAGGGCA CGGTCGACAT CGCCGCCAAC
CAGTGGACCA ACGACAACGA CTCGACGCTG GCGCAGATGC TGAACAAAGG CATGCTGAAG
AACGCCGACG GTAGCGCGAT GAAGAAGGAA GACTTCCGCA TCGTCCACAA GTCCGCACCA
GTCATCAACG GACCTTACGC CTACAATGCG GATCTGCCGG AAGACCTGAA GGCGGCGATC
GCCAAGGCGT TCCTCGACGC ACCGACCAAG GGTAAGGCGG CTTTCGATCG CCTCTCGGAC
GGCCAGAAGC AGGGCTTTCA TGCTGCGACC ACCAAGGATT GGGACGGCAC CATCGAGTTG
ATCCGGTTCG TCGACGCGTT GCGTAAGAAG AAGGCCTCCT GA
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| Protein sequence | MTINRRSVLL TAAALAFTAS AATAQDYKSK YPELTFAVVP AENASGVTER WSPFVAYLSK
ELGVKVNLRI ANDYAAVIEG QRAGNIQLAS YGSASFARAR LTGVKTEAFA NDINKDGSTG
YYSVFFVKAS SPYKSIDEMK GKNLGLVDPN STSGNNVPRF ELDKMGISDA EGYFGKVVFT
GSHENAILAL AQGTVDIAAN QWTNDNDSTL AQMLNKGMLK NADGSAMKKE DFRIVHKSAP
VINGPYAYNA DLPEDLKAAI AKAFLDAPTK GKAAFDRLSD GQKQGFHAAT TKDWDGTIEL
IRFVDALRKK KAS
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