| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3817 |
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| Symbol | |
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| ID | 4024333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4257364 |
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| End bp | 4258068 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637964021 |
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| Product | hypothetical protein |
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| Protein accession | YP_570939 |
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| Protein GI | 91978280 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03223] putative phosphonate metabolism protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00248449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCAGAT TTCCCCGTTA CGCCATCTAT TTTCTCCCGC CGCCCGGCAG CGCGCTCGAC
CGGTTCGGGG CGACGCTGCT CGGCTACGAC GTTTTCGCCG GTGCGGAGCT GTCGTTTCCG
GACGAGATGG TGCGCGCCGT CCCGGATTGG GCCGAGATCA CCGGCGATCC GCGCAAATAC
GGCTTCCATG CCACGATGAA GGCGCCGATG GCGTTGGCCG CCGGCCACAA CGAGGCGGAG
CTGCTGTGGG CGTGCGCCAC CTTTGCGGAA ACGCCGCGGG CGATCCCGAT CATCGCGCCG
GTGATTCAAT CGATCGGCAG CTTCATCGCG TTGGTGCCTT CGTCGCCCTC CGAAGAGCTC
CTCCAATTGG CCGCCGACTG CGTGCGCAGC TTCGATCCCT TCCGCGCGCC GCTGACGCCG
GAGGATCGGG CGCGCAGAAA ACCCGCGCTG TTGACGTCTC GCCAGGTCGA GTATCTCGAT
GACTGGGGCT ATCCCTACGT GATCGAGGAA TTCCGCTTTC ACATGACGCT GACCGGTTCG
CTGGACCGCG CGCGGCACGG CGAACTGCTG GGCGTGCTGC GTGCGCAGTT CGATGCGCTT
GGTCTGGAGA CTATCGCGAT CGACCGGATC GCGGTCTGCC GACAGGACAG CGCCACTGGA
AAATTTCACA GCATCGGCCA GTTTCAACTC AGGCCGATGC TGTGA
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| Protein sequence | MSRFPRYAIY FLPPPGSALD RFGATLLGYD VFAGAELSFP DEMVRAVPDW AEITGDPRKY
GFHATMKAPM ALAAGHNEAE LLWACATFAE TPRAIPIIAP VIQSIGSFIA LVPSSPSEEL
LQLAADCVRS FDPFRAPLTP EDRARRKPAL LTSRQVEYLD DWGYPYVIEE FRFHMTLTGS
LDRARHGELL GVLRAQFDAL GLETIAIDRI AVCRQDSATG KFHSIGQFQL RPML
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