| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3804 |
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| Symbol | |
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| ID | 4024320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4244391 |
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| End bp | 4246250 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637964008 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_570926 |
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| Protein GI | 91978267 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTCT ATCGATCCCG AACGACCACT CACGGCCGCA ACATGGCCGG CGCGCGCGGC
CTGTGGCGCG CCACCGGCAT GAAGGATTCC GATTTCGGCA AGCCGATCAT CGCCGTCGTC
AACTCGTTCA CGCAGTTCGT GCCGGGCCAC GTTCATCTGA AGGACCTCGG GCAGCTCGTT
GCGCGCGAGA TCGAGGCCGC CGGCGGTGTC GCCAAGGAGT TCAACACCAT CGCGGTCGAC
GATGGCATCG CGATGGGGCA CGGCGGAATG CTGTACAGCC TGCCGTCGCG CGAACTGATC
GCCGACAGCG TCGAATACAT GGTCAACGCC CACTGCGCCG ACGCCATGGT TTGCATTTCG
AACTGTGACA AGATCACCCC CGGCATGCTG ATGGCCGCGA TGCGGCTGAA CATCCCCGCG
GTGTTCGTCT CCGGCGGCCC GATGGAAGCC GGCAAGGTGG TGCTGAATGG CAAGACACAC
GCCGTCGACC TGATCGACGC CATGGTCGCG GCCGCCGACA GCAATATGAG CGATGCCGAT
GTGCAGGTGA TGGAGCGCTC GGCGTGCCCG ACCTGCGGCT CGTGTTCGGG CATGTTCACC
GCCAATTCGA TGAACTGCCT CGCCGAGGCG CTGGGTCTCG CGCTGCCCGG CAATGGCTCG
GTGCTCGCCA CCCATGCCGA TCGCAAGCGG CTGTTCGTCG AGGCCGGTCA CACCATCGTC
GATCTGGCGC GGCGTTACTA CGAAGGTGAC GACGAATCCG TGCTGCCGCG CAACGTCGCC
AGCTTCAAAG CGTTCGAGAA CGCGATGACG CTCGACATCG CGATGGGTGG CTCGACCAAT
ACGGTGCTGC ATCTGCTCGC CGCGGCGCGC GAGGCCGAAC TCGACTTCTC GATGAAGGAC
ATCGACCGGC TGTCGCGCAA GGTGCCGTGC CTGAGCAAGA TCGCCCCGTC GGTGTCCGAC
GTTCACATGG AGGACGTGCA TCGCGCCGGC GGCATCATGG CGATCCTCGG CGAGCTCGAT
CGCGCCGGGC TGATCCACAA TTCCTGCCCG ACGGTGCATT CCGAGACGCT CGGTGCCGCA
CTGGCGCGTT GGGACATCCG CCAGAGCAAC AGCGAAGCGG TCCGCACCTT CTACCGCGCC
GCGCCGGGCG GCGTGCCGAC CCAGGTCGCG TTCAGCCAGG ACCGCCGCTA CGACGAGCTC
GACCTCGACC GGCAGAAGGG CGTGATCCGC GACGCGGAGC ATGCCTTCAG CAAGGACGGC
GGTCTCGCCG TGCTGTACGG CAACATCGCC GAAGACGGCT GCATCGTGAA GACCGCGGGC
GTCGACGCCT CGATCCTGAC CTTCTCCGGT CCGGCGAAAG TGTTCGAGAG TCAGGACGAT
GCGGTGTCGG CGATCCTCGG CAACAAGATT GTCGCCGGCG ACGTCATCGT CATCCGCTAC
GAAGGACCGC GCGGCGGACC GGGCATGCAG GAGATGCTGT ATCCGACCAG CTATCTGAAG
TCGAAAGGCC TCGGCAAGGC ATGCGCCTTG ATCACCGATG GCCGTTTTTC AGGCGGCACC
TCGGGGCTTT CGATCGGTCA CGTTTCGCCG GAAGCGGCCG AAGGCGGACT GATCGGTCTG
GTCCGCGATG GCGATCGCGT CGCGATCGAC ATCCCCAACC GCAGCATCAA CCTCGACGTT
TCCGCCGACG AATTGGCGCG ACGCAGCGAA GAGGAGCAGG CGCGCGGCGA CAAGGCTTGG
CAGCCGAAGG ACCGCAACCG CGTGGTCTCT GCTGCACTGC AGGCCTACGC TGCGCTGACC
ACAAGCGCGG CGAACGGCGC AGTACGCGAC GTCAACCGCC GGCTGGGAAA AGGCAAGTAA
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| Protein sequence | MPVYRSRTTT HGRNMAGARG LWRATGMKDS DFGKPIIAVV NSFTQFVPGH VHLKDLGQLV
AREIEAAGGV AKEFNTIAVD DGIAMGHGGM LYSLPSRELI ADSVEYMVNA HCADAMVCIS
NCDKITPGML MAAMRLNIPA VFVSGGPMEA GKVVLNGKTH AVDLIDAMVA AADSNMSDAD
VQVMERSACP TCGSCSGMFT ANSMNCLAEA LGLALPGNGS VLATHADRKR LFVEAGHTIV
DLARRYYEGD DESVLPRNVA SFKAFENAMT LDIAMGGSTN TVLHLLAAAR EAELDFSMKD
IDRLSRKVPC LSKIAPSVSD VHMEDVHRAG GIMAILGELD RAGLIHNSCP TVHSETLGAA
LARWDIRQSN SEAVRTFYRA APGGVPTQVA FSQDRRYDEL DLDRQKGVIR DAEHAFSKDG
GLAVLYGNIA EDGCIVKTAG VDASILTFSG PAKVFESQDD AVSAILGNKI VAGDVIVIRY
EGPRGGPGMQ EMLYPTSYLK SKGLGKACAL ITDGRFSGGT SGLSIGHVSP EAAEGGLIGL
VRDGDRVAID IPNRSINLDV SADELARRSE EEQARGDKAW QPKDRNRVVS AALQAYAALT
TSAANGAVRD VNRRLGKGK
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