Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3789 |
Symbol | |
ID | 4024305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 4229858 |
End bp | 4230544 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637963993 |
Product | response regulator receiver |
Protein accession | YP_570911 |
Protein GI | 91978252 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0916709 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGAAA ATCCCATGGA CCAGCAGACC CCCACCCGAT TGCGCGTCTT CCTCGCCGAC GATCATCCGG TCGTGCTCAG CGGCATGAAG GCTCTCGTCG CCGGCGATCC CGCGATCGAA ATCGTCGGCG AGGCGAGCGA CGGGCCAAAC GCGCTGCGGC GCGCGATTGA ACTCAAGCCG GACGTCGCAG TGCTCGATCT GTCGATGCCC GGCCTGAACG GAATCGAGGT GGCGCGGAAA TTCCTCGCCG CCTGTCCCGA ATGCCGGGTG CTGGTGCTGA CCGTGCACGA GGACGGCGCC TATCTGCGCC AACTCCTCGA CCTCGGCGTG TCCGGCTACG TGCTGAAGCG TTCCGCCACC GAAGAACTGA TCCGCGGCAT TCACGCCGTC GGCTCGGGCG GCATCTATCT CGATCCGGCG ATCGCCGGCC GGGCGATCGG CCGCGCCGCG CCGCACGCAA GCGACAGCGA GGAGCATAGC GCGGTCTCCG AACTCTCGAC CCGCGAGATC GAGGTGCTTC GGCTCGCTGC GGTCGGCCAC AGCAACAAGA CGATCGCCGC CAAGCTGCAG ATCGGCGCCA AGAGCGTCGA GACCTACAAG GCGCGCGGCA TGGCCAAGCT CGGCTTCCAC AATCGCGTCG AAGTGGTGCG CTTTGCGCTG AGCATGGGCT GGCTGGCGGA TCCGTAG
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Protein sequence | MEENPMDQQT PTRLRVFLAD DHPVVLSGMK ALVAGDPAIE IVGEASDGPN ALRRAIELKP DVAVLDLSMP GLNGIEVARK FLAACPECRV LVLTVHEDGA YLRQLLDLGV SGYVLKRSAT EELIRGIHAV GSGGIYLDPA IAGRAIGRAA PHASDSEEHS AVSELSTREI EVLRLAAVGH SNKTIAAKLQ IGAKSVETYK ARGMAKLGFH NRVEVVRFAL SMGWLADP
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