Gene RPD_3784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3784 
Symbol 
ID4024300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4224535 
End bp4225197 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content60% 
IMG OID637963988 
Producthypothetical protein 
Protein accessionYP_570906 
Protein GI91978247 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0249757 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAA TCATCACCCG GTTGTACGAT TCCAGCAGCA AGCTCGCTGC GCTGGAAGCC 
GACCTGAAGA AGAACAACTA CAAATATTCC GTCGTCACCG GCTATCAGGC CGGCAAGGCG
AGCTCCGCCG ACGACATCGC CGCCGCTCTG GGCAGGGCCT ATGTGTCGCG CGGCGACGCC
CGGACCTATG CGGACTACGT CAAGAAGGGC GCCGTCGTGG TCGCCGTGCA GGCCGAGTTC
GGATTCGCCG CCAAGGCGAC GACGATCCTC GACAGCTACG GCCCGAACAA GATCAGCATG
CAATCATCGT CGTCGGCCGG CTTGGAAATG AGCGAGGCGA CGCCGTTTTC GAACATGATT
CATGCCAAGG CACTGCTCGA CACCTCGGGC AAGTACAAAT CCTATTCCGG CGACTGGCTG
CTCGTCGACA GCGACAAGAC CTTCTCGGGT ACGCCGCTCG TCATCAGCAG CAAGGGCCCG
TATCAGTCGT TTTCCGGAAC ACCGTTGCTG CTCGACAGCA GCGGTCCCTA CAAGTCCTTC
TCCGGGACTC CCGTGTTGCT GGACAGCAGC GGTCCGTACA AATCCTATTC GGGCGAGCCG
CTACTGATCA ACAAACCGAC CATCTTCTCC TCCTGGCTGG GCCTGCCAGT GCTCTCTAAG
TAA
 
Protein sequence
MTQIITRLYD SSSKLAALEA DLKKNNYKYS VVTGYQAGKA SSADDIAAAL GRAYVSRGDA 
RTYADYVKKG AVVVAVQAEF GFAAKATTIL DSYGPNKISM QSSSSAGLEM SEATPFSNMI
HAKALLDTSG KYKSYSGDWL LVDSDKTFSG TPLVISSKGP YQSFSGTPLL LDSSGPYKSF
SGTPVLLDSS GPYKSYSGEP LLINKPTIFS SWLGLPVLSK