Gene RPD_3779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3779 
Symbol 
ID4024295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4217206 
End bp4217643 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content64% 
IMG OID637963983 
Producthypothetical protein 
Protein accessionYP_570901 
Protein GI91978242 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0430029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0538265 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGAG ACCAACCCAT TAGCTGGCTG ATGTTCTTCA CATTGGCCGC CGGCGCCGTG 
ATTGTCGGAT TCGTGTTCCT CAACTTCATC CGGTCGCGCT CGAACCGCGC CGTTGCGGCC
GACACTCTGG AAGGGAACGG CACCGGGCGC GGCGCTGCGC CCGACGGTGC GCTGCCCGAA
CTGGCGGGAA TCGCCGTGTT TGCCCTGGTC GCGATGGCTC TTCTGGCGAC CGGCGTGAAC
TCTCGCAATA CACAGACCGC CGAGGTTGCG CCGCCTGCGG CAAGTGGAAC GACCGGCATG
GCTCAGCCCA AGAATATTCA GAACGAGCCG AAGCGCTATC AGCCGAACAA TCCCGGCACC
GATACGCGCA CTGCGCCGAC CGCTTCTGAT GCGGGCGTCG GCAATTCGCC CGGTTCGACC
GGAACGCTGA CCAAGTAA
 
Protein sequence
MDGDQPISWL MFFTLAAGAV IVGFVFLNFI RSRSNRAVAA DTLEGNGTGR GAAPDGALPE 
LAGIAVFALV AMALLATGVN SRNTQTAEVA PPAASGTTGM AQPKNIQNEP KRYQPNNPGT
DTRTAPTASD AGVGNSPGST GTLTK