| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3726 |
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| Symbol | |
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| ID | 4024242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4161312 |
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| End bp | 4162415 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637963930 |
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| Product | magnesium-protoporphyrin IX monomethyl ester cyclase |
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| Protein accession | YP_570848 |
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| Protein GI | 91978189 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02029] magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000205151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00410479 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTCCGA TGGAGGGCGG CGCCCAAGGC GCGCTTCGAA CCAATTCCCG GCCCGCGATC
AAGGGCAGCG TCGACAGTCT GAACATCGCG AAGGAGGATA CGATCCTCAC GCCGCGGTTC
TATACGACCG ACTATGCCGC GATGGACAAG CTCGACGTCA GCCTGGTTCG TTCCGAGTGG
AACGCGATGA TGAACGAGAT GCGCGCCGAC TATAACAAGG CGCACTTCAA GAAGACCGAC
GAGTTCCTCG AAAGCGACCT CGACAAGCTT CCGCCGGAAC TGCTTATCGA GTTCAAGGAC
TTCCTGGTGT CGTCGTTGAC CGCAGAGTTC TCCGGCTGCG TGCTGTATTC CGAGATCAAG
AAGCGGATCA AGAATCCCGA GATTCGTGAG CTGTTCGGAC TGCTCAGCCG CGATGAAGCC
CGCCACGCCG GCTTCATCAA CGAGATCCTC AAGGATCACG GCATCGGCGT CGATCTGTCG
TTCCTGACTA AGGTCAAGAA GTACACCTAC TTCCGGCCGA AGTTCATTTT CTACGCGACC
TATCTGTCGG AGAAGATCGG CTACGCCCGC TACATCACCA TCTACCGGCA GATGGAGCGC
CATCCCGAGC GCCGCTTCCA TCCGATCTTC AAATGGTTCG AGCGCTGGTG CAACGACGAG
TTCCGCCACG GCGAGGCGTT CGCGCTGTTG ATGCGCGCCG ATCCCTCACT GCTGCGCGGC
GTCAACAAGC TGTGGATCCG GTTCTTCCTG CTCGCGGTGT TTGCCACGAT GTATGTGCGC
GATCACATGC GGCCGGCGTT CTACGACGCG CTCGGCGTCG ACGCCACCGA CTACGACATG
CAGGTGTTCC GCGTCACCAC CGAGATCTCC AAGCAGGTCT TCCCGGTGAT GATCAATCTC
GACGATCCGC GGTTCCTGGC GGGCCTCGAG CGGCTGCGCA AGGTGTCGGA AAAGATCGCC
GAATCCCGCA GCCAAGGTTT CGTCGGCAAG CTGAAGCGGC CGCTTTATGC AGCGTCCGCC
GCGATCGCCT TCGGTCGCCT ATTCCTGCTT CCCGCGAAAC GCAACGAACT GCCTCGCGTG
ATCGGCCTTC GGCCGGCTTG GTGA
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| Protein sequence | MIPMEGGAQG ALRTNSRPAI KGSVDSLNIA KEDTILTPRF YTTDYAAMDK LDVSLVRSEW
NAMMNEMRAD YNKAHFKKTD EFLESDLDKL PPELLIEFKD FLVSSLTAEF SGCVLYSEIK
KRIKNPEIRE LFGLLSRDEA RHAGFINEIL KDHGIGVDLS FLTKVKKYTY FRPKFIFYAT
YLSEKIGYAR YITIYRQMER HPERRFHPIF KWFERWCNDE FRHGEAFALL MRADPSLLRG
VNKLWIRFFL LAVFATMYVR DHMRPAFYDA LGVDATDYDM QVFRVTTEIS KQVFPVMINL
DDPRFLAGLE RLRKVSEKIA ESRSQGFVGK LKRPLYAASA AIAFGRLFLL PAKRNELPRV
IGLRPAW
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