| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3699 |
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| Symbol | |
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| ID | 4024215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4127365 |
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| End bp | 4128987 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637963903 |
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| Product | benzoylformate decarboxylase |
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| Protein accession | YP_570821 |
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| Protein GI | 91978162 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.637419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGCCA AGAACAAAGC CGCGCCGCGC GCGGTCAGCG TGAAGGAGGC GACGCTCGAT
TTGCTGCGCG CCTTGGGGAT CGACAAGGTG TTCGGCAATC CCGGATCGAC CGAGCTGCCG
TTTCTCAGCG ACTGGCCCGG CGATATCGAC TACGTCCTCG CGCTGCAGGA GGCCAGTGCG
GTGGCGATGG CGGACGGCTA TGCGCAGGCC ACGCGCAACG CCGGCTTCGT CAATCTGCAT
TCGGCGGCCG GCGTCGGCAA CGCGCTCGGT AACATCTACA CGGCGTTCAA GAACCAGACG
CCGTTGGTGA TCACCGCCGG ACAGCAGGCG CGCAGCCTGC TTCCCTTGCA GCCGTTTCTC
GGCGCCGAGC GCGCCAGCGA ATTTCCGCGG CCTTACGTGA AGTACAGCGT CGAACCGGCG
CGCGCCGAAG ATGTCCCGGC CGCGATCGCG CGCGCCTACG CCGTGGCGAT GCAGCCGCCA
TGCGGACCGA CCTTTGTGTC GGTGCCGATC GACGACTGGG CGCGGCCCGC GTCGCCCGTC
GTGCCCAGAA TGGTGACCCG CGAGCGCGGC CCGGAGCGCG CGGCAATGCA GGCGCTGGCC
GAGGCGCTGG CCTCTGCCAA AAAGCCGGCA CTGGTGGTCG GCCCTTCGGT CGATCGCGCC
GCAGCGGTCG ATCTGATGGT GAAGGTCGCG GAGCGCACCA ATGCGCCGGT GTGGGTGAGC
CCGTTCTCGG CGCGCTGCAG CTTCCCGGAG CGGCACAGGC TGTTCGCCGG ATTCCTGCAC
GCCTCTCCCG GACAACTCTC CGAGGCGCTC AGCAGACACG ACGTCGTTGT GGTGATCGGC
GCGCCGGTGT TCACCTTCCA CGTCGAGGGC CATGCGTCGA TCTTCGACGG CGCGGCGACG
CTGTTCCAGA TCACCGAGGA CGCCGACGCC GCGTCGGTGA CGCCGTTCGG CGCCAGCATT
GTTGCGACGA TGAAGCCGGC GCTGGATTTG CTGCTGGAGC TGTTGCCGGA AACCAACCGC
GCCGCGCCTC CGGCACGTAC ATTGCCCCCT GCGCCGCGAG CCGCCGATCC GATGCCGGCG
GAAGTCGTGC TGCACGAACT CGCGACGACG ATGCCGGCCG ACGCGATGCT GGTGGAGGAA
GCGCCGTCGC ATCGTCTGGC CATGCAAAAA TACTTGCCGA TGCCCGGCCA GGACAGCTTT
GCGACGATGG CGAGCGGCGG GCTCGGCTGG TCGCTGCCGG CCGCGGTCGG CTTCGCGCTG
GCGCTTCGAA AGCGCCGCAC CATCTGCCTG ATCGGCGACG GCTCGGCGAT GTATTCGATC
CAGGCGCTGT GGACGGCGGC GCGGCGTAAG CTGCCGCTGA CGGTGGTGGT GCTGAACAAT
GGCGGCTACG GCGCGATGCG CTCGTTCAGC CAGGTGATGC AGGTTCGCGA CGTGCCGGGA
CTCGCGCTGC CGGGAATCGA TTTCGTGCAA CTCGCGCAAT CGATGGGCTG CGACGCCGAG
CGCGTGTCAC GCTGCGACGA CCTCGCGCCG GCGCTGGCTC GCGCGCTGTC ATACGACGGC
GTATTTGTGG TCGAAGCGAT GCTGGATCGT TCGGTGCCGC TGCTCTACGC GAAGAACGGG
TAG
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| Protein sequence | MPAKNKAAPR AVSVKEATLD LLRALGIDKV FGNPGSTELP FLSDWPGDID YVLALQEASA
VAMADGYAQA TRNAGFVNLH SAAGVGNALG NIYTAFKNQT PLVITAGQQA RSLLPLQPFL
GAERASEFPR PYVKYSVEPA RAEDVPAAIA RAYAVAMQPP CGPTFVSVPI DDWARPASPV
VPRMVTRERG PERAAMQALA EALASAKKPA LVVGPSVDRA AAVDLMVKVA ERTNAPVWVS
PFSARCSFPE RHRLFAGFLH ASPGQLSEAL SRHDVVVVIG APVFTFHVEG HASIFDGAAT
LFQITEDADA ASVTPFGASI VATMKPALDL LLELLPETNR AAPPARTLPP APRAADPMPA
EVVLHELATT MPADAMLVEE APSHRLAMQK YLPMPGQDSF ATMASGGLGW SLPAAVGFAL
ALRKRRTICL IGDGSAMYSI QALWTAARRK LPLTVVVLNN GGYGAMRSFS QVMQVRDVPG
LALPGIDFVQ LAQSMGCDAE RVSRCDDLAP ALARALSYDG VFVVEAMLDR SVPLLYAKNG
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