| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3678 |
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| Symbol | |
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| ID | 4024193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4103882 |
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| End bp | 4106659 |
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| Gene Length | 2778 bp |
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| Protein Length | 925 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963882 |
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| Product | ATP-binding region, ATPase-like |
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| Protein accession | YP_570801 |
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| Protein GI | 91978142 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0781071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATC TTCTGCGTGA GTTCTTGACG GAAACTTTCG AGAGTCTGGA CACGGTTGAC
AATCAGCTTG TCCGCTTCGA GCAGGAGCCC AATAACGCAA AGATATTGGA CAATATCTTC
AGGCTTGTTC ACACCATCAA GGGCACCTGC GGATTCCTCG GCCTGCCGCG CCTGGAAGCG
CTGGCGCACG CGGCAGAAAC CCTGATGGGT AAATTCCGCG ACGGCATGCC GGTCACCGGC
GAGGCCGTCA CGCTGATCCT GACCACGCTC GATCGGATCA AGGACATTCT CGGCGGTCTC
GAGGCAAGCG AAGCAGAACC CCCGGGCGAG GACGGCGACC TGATCGGCGA ACTGGAGCGG
CTCTCGATGC GCACGCCCGA ACAGATCGCA CTCGAACTCG GCGAGTCCGC AGCGGTCGCG
GAAGCTGCTC CGGATGCTCC GGAGGCTGCT CCTGAGCCCG AACAGACCGA AGGCACCTTG
GTAGCGCAGA CGCTGGAGCG TCCGCTCCGG CCGGGCGAGG TCTCGCTCGA CGAATTGGAA
CGGGCATTCC AGGAGACCGC GATCGAGGCC GCCTCACCGG CGCTCGAGAC GGTCGTGGCG
CCCGCTGCGG TGGCCGAGGT GGCCGAGGTG GCCGCCAAGC CGGCGGCGAA GCCCGCCGTC
AAGGCCGCCA AGAAGGGTGA ACAGGACCCG GCGCCGGCGG AAGGCGACCG GATCGCCAAT
CAATCGATTC GCGTCAATGT CGATACGCTC GAGCACCTGA TGACGATGGT GTCCGAGCTG
GTGTTGACCC GCAATCAGCT GCTCGAAATC AGCCGCCGCC ATGAGGACAC CGAATTCAAG
GTGCCGTTGC AGCGGCTCTC GACCGTCACC GCCGAGTTGC AGGACGGCGT GATGAAGACC
CGGATGCAGC CGATCGGCAA CGCCTGGCAG AAGCTGCCGC GCATCGTGCG CGATCTCGCC
TCCGAACTCG GCAAGCATAT CGAGCTCGAG ATGCACGGCG CCGACACCGA GCTCGATCGG
CAGGTGCTCG ACCTGATCAA GGATCCGCTC ACCCACATGG TGCGCAACTC CGCCGATCAC
GGGCTGGAGC GGCCCGAGGA TCGGGTGCGC AACGGCAAGC CTGAGCAGGG CACCATCCGC
CTGTCCGCCT ATCATGAAGG CGGCCACATC GTGATCTGCA TCGCCGATAA CGGCCGCGGA
CTCGACACCG ATCGGATCAA GGCCAAGGCG ATCGCCAACG GCCTCGTCAC CGAGGCCGAG
GTCGAGAAGA TGACCGAGGC GCAGATCCAC AAATTCATTT TCGCGCCCGG CTTCTCGACC
GCCGCGCAGG TGACCAGCGT GTCCGGCCGC GGCGTCGGCA TGGATGTGGT GCGCACCAAC
ATCGACCAGA TCGGCGGCAC CATCGAGATC AAGTCGGTGG CCGGCGAGGG CTCGAGCGTC
ACCATCAAGA TTCCGCTGAC ACTCGCGATC GTCTCGGCGC TGATCGTCGA AGCCGGCGGC
GACCGCTTCG CGATCCCGCA GCTCGCGGTC GTCGAGCTGG TGCGGGCGCG CGCCAATTCC
GAGCACCGGA TCGAGCGGAT CAAGGATACG CCGGTGCTGC GCTTGCGCGA CAAGCTGCTG
CCGCTGATGC ATCTGAAGAA GCTGCTGCAT ATCGACGACG GCACCGCGCT TTCCGAGCCG
GAGAACGGCT TCATCGTGGT GACGCAGGTC GGTAGCCAGA CCTTCGGCAT CGTGGTCGAC
GCGGTTTTCC ACACCGAGGA AATCGTGGTC AAGCCGATGT CGACCAAGCT GCGCCACATC
GGGATGTTCT CGGGCAACAC CATTCTGGGC GACGGCGCGG TGATCATGAT CGTCGATCCG
AACGGCATCG CGCAGGCGCT CGGCACTTCG GTGTCGGCGC AGCACGATCT GTCGGAGCAG
AACGCAGCGA CCCGCGCGGC CTCGACCGAA CAGCTCACCT CGCTTCTGGT GTTCCGCGCC
GGCTCGGCGC ATCCGAAGGC GGTGCCGCTG TCGCTGGTGA CGCGCCTCGA GGAAATCGCC
GCCGAGAAGA TCGAGTACTC GAACGGCCGG CATATGGTGC AGTATCGCGA TCAACTGATG
CCGCTGGTGC TGATGGAGGG CGTTAATGTC GCCACCACCG GCGTGCAGCC GATCCTGGTG
TTCGTCGATG ACGATCGCAG CATGGGGCTC GTGGTCGATG AGATCGTCGA TATCGTCGAA
GAGCATCTGC AGATCCAGGT CGGCTCCAGC CGCGAAGGAA TTCTCGGCTC GGCGGTGATC
AAGGGGCTCG CGACGGAAGT GATCGACGTT GCTCACTTCC TGCCGATGGC TTTTGCCGAC
TGGCTCTCCC GCAAGGAAAT GAAGCAGTCG ATCGCCAGCC GCTCGGTGTT GCTGGTCGAC
GACTCCGCCT TCTTCCGCAA CATGCTCGGC CCCGTGCTGA AGGCGGCCGG CTACAGGGTT
CGGCTGGCGA CTTCGGCAAT CGAGGCGCTC GGAGTGCTGC GCACAGGTGT GCAGTTCGAC
GCGATCCTGA CCGACATCGA AATGCCGGAG ATGAACGGCT TCGAATTCGC CGAGGCGATC
CGCGCCGATG CCAAGCTCGC GCCGACGCCG GTGATCGCGC TGTCGTCGCT GGTGTCGCCG
GCGGCGATCG AGCGGGGCCG TCAGGCCGGT CTCACCGACT ACGTCGCCAA GTTCGACCGT
CCTGGCCTGA TCGCGGCGCT CAAGGAGCAG ACCGTGGACA ATGAGCCGGT CAGGGCGTTG
CAGCAACAAG CGGCGTGA
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| Protein sequence | MDDLLREFLT ETFESLDTVD NQLVRFEQEP NNAKILDNIF RLVHTIKGTC GFLGLPRLEA
LAHAAETLMG KFRDGMPVTG EAVTLILTTL DRIKDILGGL EASEAEPPGE DGDLIGELER
LSMRTPEQIA LELGESAAVA EAAPDAPEAA PEPEQTEGTL VAQTLERPLR PGEVSLDELE
RAFQETAIEA ASPALETVVA PAAVAEVAEV AAKPAAKPAV KAAKKGEQDP APAEGDRIAN
QSIRVNVDTL EHLMTMVSEL VLTRNQLLEI SRRHEDTEFK VPLQRLSTVT AELQDGVMKT
RMQPIGNAWQ KLPRIVRDLA SELGKHIELE MHGADTELDR QVLDLIKDPL THMVRNSADH
GLERPEDRVR NGKPEQGTIR LSAYHEGGHI VICIADNGRG LDTDRIKAKA IANGLVTEAE
VEKMTEAQIH KFIFAPGFST AAQVTSVSGR GVGMDVVRTN IDQIGGTIEI KSVAGEGSSV
TIKIPLTLAI VSALIVEAGG DRFAIPQLAV VELVRARANS EHRIERIKDT PVLRLRDKLL
PLMHLKKLLH IDDGTALSEP ENGFIVVTQV GSQTFGIVVD AVFHTEEIVV KPMSTKLRHI
GMFSGNTILG DGAVIMIVDP NGIAQALGTS VSAQHDLSEQ NAATRAASTE QLTSLLVFRA
GSAHPKAVPL SLVTRLEEIA AEKIEYSNGR HMVQYRDQLM PLVLMEGVNV ATTGVQPILV
FVDDDRSMGL VVDEIVDIVE EHLQIQVGSS REGILGSAVI KGLATEVIDV AHFLPMAFAD
WLSRKEMKQS IASRSVLLVD DSAFFRNMLG PVLKAAGYRV RLATSAIEAL GVLRTGVQFD
AILTDIEMPE MNGFEFAEAI RADAKLAPTP VIALSSLVSP AAIERGRQAG LTDYVAKFDR
PGLIAALKEQ TVDNEPVRAL QQQAA
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