| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3669 |
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| Symbol | |
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| ID | 4024184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4096824 |
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| End bp | 4097372 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637963874 |
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| Product | sigma-70 region 2 |
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| Protein accession | YP_570793 |
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| Protein GI | 91978134 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGACGT CGGCTGAGTT GGTCTGGCTG CTTGCCGCTG TGGCCAAAGG GGATCAGGCG
GCTTTCGAGC GGCTTTACAA TGCGACGCGC GCGAAACTCT ACGGCGTGGT TCTCCGTATA
TTGAGACGTC AGGATCTCGC AGAAGAGGTC GTCCAGGAAG CTTACGTCAA GATCTGGAAT
AGCGCCGGAC AGTTCAATCC CGGCGTGGCG TCTCCGATCA CCTGGATGGT CTCGATCGCG
CGGAATCGGG CGATCGACGT GGCGCGCAAG CGCAGCGAGG TCTCGATCGA GGATGAGCCC
TCGGCACAGG AAGCGGCGGC AGATTCGCCG GATCCGCTGG CGCGCCGGGA GATGACAGAA
GAATTGAAGC GACTGCTCGA ATGCGTCGGC CGGCTGGAGC CGGACCGTCA GAAATTGGTG
CTGCTCGCTT ACTACAATGG TTGGAGCCGC GAACAGCTCG CGGCGAAGTT CGATGCGCCG
GTAAACACGG TCAAGACGTG GCTTCGACGC AGCCTGCTCG ACGTTCGGGA GTGTCTGGGA
CTCGTATAA
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| Protein sequence | MLTSAELVWL LAAVAKGDQA AFERLYNATR AKLYGVVLRI LRRQDLAEEV VQEAYVKIWN
SAGQFNPGVA SPITWMVSIA RNRAIDVARK RSEVSIEDEP SAQEAAADSP DPLARREMTE
ELKRLLECVG RLEPDRQKLV LLAYYNGWSR EQLAAKFDAP VNTVKTWLRR SLLDVRECLG
LV
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