| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3561 |
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| Symbol | |
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| ID | 4024075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3960396 |
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| End bp | 3961625 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637963765 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_570685 |
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| Protein GI | 91978026 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTTT CCAGTTCGAG ACTGGCTGTT CTCTCGGCCG CCGCAATGCT GTTTGCGGCG
TCCAGCCACG GCGCCCTTGC CCAGAAGAAA TACGACCCCG GTGTCAGCGA CACCGAAATC
AAGATCGGCA ATGTCGAGGC CTATAGCGGT CCGGCCTCGG CTTACGGCGT CATCGGCAAG
ACCGAGGACG CCTATTTCAA GATGATCAAC GATCAGGGCG GCATCAACGG CCGCAAGATC
AAGTTCATCA GCTATGACGA CGCCTACTCG CCGCCAAAGA CGGTGGAACA GGTCCGCAAG
CTGATCGAGA GTGACGAAGT GTTCCTGGTG TTCAACGCGC TCGGCACGCC GACCCAGACC
GCGGTGCAGA AGTATCACAA CGTCAAGAAG GTCCCGCAAT TGTTCGTTGC AACCGGCGCG
AGCAAATGGA ACGACCCGAA GGACTTCCCC TGGTCTATGG GCTTCCAGCC GAGCTACCGC
GTCGAAGCGC GAGTCTTCGC CAAGTACATT CTCAAGGAGA AACCGAACGC CAAGGTCGCG
GTGTTCTACG CAAATGACGA TTTCGGCAAG GACTATCTGA TCGGGCTCAA GGACGTGTTC
GGCGCCAACA GCTCGAAAAT CATCGTCGCC GAGGAAAGCT ACGAGACCTC CGAGCCGTCA
ATCGACGCCC ATATCGTCAA GCTGAAGGGC ACCGGCGCCG ACGTGTTCGT CAACATCTCG
ACGCCGAAAT TCGCCGCCCA GGCGATCAAG AAGATGGCCG AGCTCGACTG GAAGCCGATG
CACCTGATGA CCGACGTGTC GATTTCGATC GGCGCGGTGA TGAAGCCCGC CGGCCTCGAC
GCCTCGGAGG GCGTGCTGTC CGCAGGCTAC CTCAAGGACG CCTCGGATTC GCAGTGGGAC
AACGACGAGG GCATGAAGAA ATTCAAGGCC TTCCTCGACA AGAACATGCC CGGCGCCAAT
ATCGCCGATA CCAACCTCGT CTACGGCTAT ACCGCAGCGC AAACCATGGT GCAGGTGCTG
AAGCAGGCCG GCGACAATCT GACCCGCGAG AACGTGATGA AGCAGGCGGC CAGCATCAAG
GACTTCGCCG CCGACACCCT GCTGCCTGGG ATCAAGATCA ATACCTCGGC GACCGACTTC
GCACCGATCG AGCAACTGCA GATGATGCGG TTCACCAAGG GCAAGTGGGA GATGTTCGGC
GAGATCATCA GCGCCGAAAC CGGCGGCTGA
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| Protein sequence | MSFSSSRLAV LSAAAMLFAA SSHGALAQKK YDPGVSDTEI KIGNVEAYSG PASAYGVIGK
TEDAYFKMIN DQGGINGRKI KFISYDDAYS PPKTVEQVRK LIESDEVFLV FNALGTPTQT
AVQKYHNVKK VPQLFVATGA SKWNDPKDFP WSMGFQPSYR VEARVFAKYI LKEKPNAKVA
VFYANDDFGK DYLIGLKDVF GANSSKIIVA EESYETSEPS IDAHIVKLKG TGADVFVNIS
TPKFAAQAIK KMAELDWKPM HLMTDVSISI GAVMKPAGLD ASEGVLSAGY LKDASDSQWD
NDEGMKKFKA FLDKNMPGAN IADTNLVYGY TAAQTMVQVL KQAGDNLTRE NVMKQAASIK
DFAADTLLPG IKINTSATDF APIEQLQMMR FTKGKWEMFG EIISAETGG
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