| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3560 |
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| Symbol | |
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| ID | 4024074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3958898 |
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| End bp | 3960133 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637963764 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_570684 |
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| Protein GI | 91978025 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.726041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACTT TCCGTTCGCG CGCGCTCGTC TTTTCAGCAG CCGTCGCGGT CAGCTTCGCA
GCGTTCAACG GCGCTGCCCA TGCTCAAAAG AAATACGACA CCGGCGCGTC CGATACCGAG
ATCAAGATCG GCAACGTCAT TCCCTACTCA GGCCCGGCGT CGGCCTACGG CACGATCGGC
AAGACCGAAG AAGCCTATTT CAGGATGGTC AACGACAAGG GCGGCATCAA CGGCCGCAAG
GTCACCTTCA TCAGCTATGA CGACGCCTAT TCGCCGCCGA AAGCCGTCGA GCAGGTCCGC
AAGCTGGTGG AGAGCGACGA GGTGCTCGTG GTGTTCAACC CGCTCGGCAC GCCGTCCAAC
ACCGCGGTTC AGAAATATCT CAACGCCAAG AAGGTGCCGC AGCTGTTCGT CGCCTCCGGC
GCGACCAAGT GGAACGACCC GAAGAACTTC CCCTGGACGA TCGGCTGGCA GCCGTCCTAC
CAGAGCGAAG CGCAGATCTA CACCAAGTAT CTGCTCAAGG AGAAGCCGGA CGCCAAGATC
GGCATCCTCT ATCAGAACGA CGATTTCGGC AAAGACTACC TGAAGGGCAC CAAAGACGGG
CTCGGCGCCA AGGCCGCCTC GATGATCGTC GCCGAGGAAA GCTACGAAAT CTCCGCGCCG
ACCATCGACA CCAACATCGT CAAGCTGAAG TCGGCCAATC CCGACGTCGT GCTGATCTAC
ACCACGCCGA AATTCGGCGC GCAGACCATC AAGAAGATCG CCGAGCTGAG CTGGAAGCCG
ATGATCATCA TCACCAACGT CTCGGCCTCG GTCGGCAGCG TGATGCGGCC CGCCGGCTTC
GAGAACGCCC AGGGCGTGCT GTCGGCCAAC TACGTCAAGG ACGCCACCGA CGCGCAATGG
GACAACGACC CCAAGTTCAA GAACTGGCAC GCCTTCGTCG AGACCTACAT GCCGGGCGCG
GCCAAGACCG ACAGCAACAT GGTGTACGGC TACGGCGCCG CCCAGACGCT GCACAAGGTG
CTCGAGATGT GCGGCGACGA CCTGACCCGC GCCAATGTGA TGAAGCAGGC GGCCAACCTG
AAGAACTTCG AGACCGACAC CCTGCTGCCC GCCATCAAGA TCAACACCTC GGCGACCGAC
TTCGCCCCGA TCAGCCAACT CCAGATGATG CGCTTCAAAG GCGAGCGCTG GGAGCGGTTT
GGCGAGATCA TCTCGGGCGA CGTCGCCGTC GACTAA
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| Protein sequence | MPTFRSRALV FSAAVAVSFA AFNGAAHAQK KYDTGASDTE IKIGNVIPYS GPASAYGTIG
KTEEAYFRMV NDKGGINGRK VTFISYDDAY SPPKAVEQVR KLVESDEVLV VFNPLGTPSN
TAVQKYLNAK KVPQLFVASG ATKWNDPKNF PWTIGWQPSY QSEAQIYTKY LLKEKPDAKI
GILYQNDDFG KDYLKGTKDG LGAKAASMIV AEESYEISAP TIDTNIVKLK SANPDVVLIY
TTPKFGAQTI KKIAELSWKP MIIITNVSAS VGSVMRPAGF ENAQGVLSAN YVKDATDAQW
DNDPKFKNWH AFVETYMPGA AKTDSNMVYG YGAAQTLHKV LEMCGDDLTR ANVMKQAANL
KNFETDTLLP AIKINTSATD FAPISQLQMM RFKGERWERF GEIISGDVAV D
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