| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3487 |
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| Symbol | |
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| ID | 4024001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3876534 |
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| End bp | 3879323 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963691 |
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| Product | malto-oligosyltrehalose synthase |
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| Protein accession | YP_570611 |
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| Protein GI | 91977952 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3280] Maltooligosyl trehalose synthase |
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| TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCTG CGATTCCGAC TGCAACCTAC CGCATTCAGC TCACCGCCGA TTTCGGCTTC
GACGATGCGG CCGCGATCGT GCCGTATCTG AAAGCGCTCG GCATTTCGCA TCTCTACGCC
TCGCCCTTCA CCAAAGCGCG CAAGGGCTCG ACCCACGGCT ACGACATCGT CGATCACACC
CAACTCAATC CCGAGTTGGG CGGCGAAGAA GGATTCGCGC GCCTGTCCGC AGCGTTGAAG
AGCCACGATA TCGGTCTGAT CCTCGACTTC GTGCCCAACC ATGTCGGCGT GCACTTCGCC
GACAATCCGT GGTGGCTCGA TGTGCTGGAA TGGGGCCCGG CGTCGCCGCA CGCGGCGTCG
TTCGATATCG ACTGGGACAT CCTGCCGTTT CGAACCCGCG GCGGCGTGCT GCTGCCGATC
ATCGGCTCCT CTTACGGCAA GGCGCTGGAA AGCGGCGAGA TCGAGCTGCG CTACGATCCC
GACGAAGGCA GTTTCTCGGC GTGGTACTTC GAGCACCGAC TGCCGATCGC GCCGCAGCGC
TACAGCGAGA TCCTGCGCGC CATCGTGCGC GAGGCCGACG CCGCCGATGA TCCTGCCGGC
AAAGCGATCC TCGACCTCGC CGCACGCTAT CGCGGGCTGC GCCATCCCGA CCGCAACGAG
GCCCCTGCGT TCAAGGCCGC GCTGAAAGCG ATCCCCGGCA GCGCGGCGCT GATCGACAAG
GGGCTGCTCG CCTATCGCGC GGGCGAAGGC CGCACTGCGC AGATCCAGGC GCTGCACAAT
CTGCTGGAGC GCCAGCACTA CAAGCTCGGC CATTGGCAGC TCGCGGCGAG CGAGATCAAC
TATCGGCGTT TCTTCGACGT CAATACCCTC GCCGGCCTGC GCGTCGAGGA CGGCGGCACG
TTCGAGGCGA TCCACCGGCT GGTGAAGCGG CTGATCGCGG ACGGTCAGCT GCAGGGGCTG
CGGCTCGATC ACATCGACGG CCTGCGCGAC CCCGCGCAAT ATTTCCAGCG GCTGCGCCGG
CTCGCCCGCG ATGCGCAGGG AAAAGCCGCC GCGCCGCTCT ACATGGTGAT CGAAAAGATT
CTCGGCGAAG GCGAAGCGCT GCCGCGCTTC GCCGGCGTGC ATGGCACCAC CGGCTACGAA
TGGCTGAACG TGATCACCCA TGCGCTGGTC GACGGCGCCG GCCTGCAGCC GCTCGACGAA
GTCTGGCGGC AGGTGAGCAA CACCTCGCCG GATTTCGCGC CGGTGCTGAA GGAAGCCAAG
CGCCGCGTAC TGCAGACGCT GCTGCTCAGC GAATTCACCG TGCTGACCCG GCTGCTGGCG
CGGATCGCCG GCGGCCATTA TTCGACGCGG GATTTTTCCG CCGACAATCT GCGCCAGGTG
TTCGAACTCT ACGTGCTGCA CTTCCCGGTG TATCGCACCT ACCTCACCGC GTCGGGTCCG
ACCGCACTCG ACCGCGAGCT GATCGCGCAA ACCATCGAGA AGGCGCGCGC CGACTGGTTC
GGCGCCGACG ATGGCATCTT CGACTTCCTG CAGGACGCGC TGACGATGGA CCTGCTGAAG
CCGGGCCGCG CCGCGCACAG CAAGCCGCGG GTGCGCCGCT TCGCGCTCAA GGTCCAGCAA
TTCACCGGGC CGACCATGGC GAAGTCGCTC GAGGACACCT CGTTCTATCG CTACCACCGC
CTGCTCGCGC TCAACGAAGT CGGCGGCGAG GCCTCCGCGC ACGCGCTGGC CCCCGACGCG
TTCCACCGAC AGATGACGCA GCGCGCCAGG GATTGGCCGC ACGGCATGAC CGCGACGATG
ACGCACGACG CCAAGCGCGG CGAGGACGCG CGGACGCGGC TGCTGGCGCT GGCGGAAATG
CCGGGCGAAT GGGCGAGCCT GGTCGCCAAA TGGAAGCTGC TCAACGCACC GCATCTGGTG
ACCCACGGCG AGAGGCGCGC GCCGTCCGCG ACGTTCGAAT ACATGTTGTA TCAGGCCCTG
ATCGGCGCGT GGCCGCTGCA GCCCGACGCG GATTTCACCG ACCGGATGCA GGGCTATGCG
CTGAAGGCAG CGCGCGAAGG CAAGCAGGAA ACCAACTGGA TCAACCCGGA CCTCGCCTAT
GAGGAAGGTA TCCGCACCTT CATCGACCGC ATTCTCGACC CGGCGCAATC CGGGCCGTTT
CTGGAATCGC TGCAGAACTT GTCACAGCGC GTCTCGGTGA TCGGCGCGCT GAATTCGCTG
AGCCAGATGA CGTTGAAAGC GACGATGCCC GGCGTGCCGG ACTTCTATCA GGGTACCGAG
TTCTGGGACT TCTCGCTGGT CGACCCGGAC AACCGACGCA AGGTCGATTT CGCCGCACGC
GAAACCTCGC TTGCGGCGCT CGCCGCCCCG GACTGGGACG CGTTGCTGAC GACCTGGAGC
GACGGCCGGC TCAAGCTGGC CTGGACGCGG CAACTGCTGA AGCTGCGGTC CGAGCTGCGC
GACGTCTTCA CCGACGGCGA CTACCGGCCG CTTGCCGTCA ATGGCCCGCA TCGCGACCAC
GCGATCGCCT TCGCCCGCAG CCGCGGCGCG GACGCCGCGA TCATCGTCGT CGGAAAGAAC
TTTGCGCCGC TGTCCGATCA GGGCCGGCAA TGGCCGCGCG GCGACGCATT CGACGCAACG
GTGGAAATTT CGGGCCTTGT CATCGATGGC GACGACCGCA CCGAGCTGCC TCTCAGCGAG
CTGTTTTGCG ATTTGCCGGT CGCTATCCGC CGGGCGCGTG TTGTAAACGC GAAGCGGACA
GTCAGGACAC GCCGCAAGAG CGACGCATAG
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| Protein sequence | MPPAIPTATY RIQLTADFGF DDAAAIVPYL KALGISHLYA SPFTKARKGS THGYDIVDHT
QLNPELGGEE GFARLSAALK SHDIGLILDF VPNHVGVHFA DNPWWLDVLE WGPASPHAAS
FDIDWDILPF RTRGGVLLPI IGSSYGKALE SGEIELRYDP DEGSFSAWYF EHRLPIAPQR
YSEILRAIVR EADAADDPAG KAILDLAARY RGLRHPDRNE APAFKAALKA IPGSAALIDK
GLLAYRAGEG RTAQIQALHN LLERQHYKLG HWQLAASEIN YRRFFDVNTL AGLRVEDGGT
FEAIHRLVKR LIADGQLQGL RLDHIDGLRD PAQYFQRLRR LARDAQGKAA APLYMVIEKI
LGEGEALPRF AGVHGTTGYE WLNVITHALV DGAGLQPLDE VWRQVSNTSP DFAPVLKEAK
RRVLQTLLLS EFTVLTRLLA RIAGGHYSTR DFSADNLRQV FELYVLHFPV YRTYLTASGP
TALDRELIAQ TIEKARADWF GADDGIFDFL QDALTMDLLK PGRAAHSKPR VRRFALKVQQ
FTGPTMAKSL EDTSFYRYHR LLALNEVGGE ASAHALAPDA FHRQMTQRAR DWPHGMTATM
THDAKRGEDA RTRLLALAEM PGEWASLVAK WKLLNAPHLV THGERRAPSA TFEYMLYQAL
IGAWPLQPDA DFTDRMQGYA LKAAREGKQE TNWINPDLAY EEGIRTFIDR ILDPAQSGPF
LESLQNLSQR VSVIGALNSL SQMTLKATMP GVPDFYQGTE FWDFSLVDPD NRRKVDFAAR
ETSLAALAAP DWDALLTTWS DGRLKLAWTR QLLKLRSELR DVFTDGDYRP LAVNGPHRDH
AIAFARSRGA DAAIIVVGKN FAPLSDQGRQ WPRGDAFDAT VEISGLVIDG DDRTELPLSE
LFCDLPVAIR RARVVNAKRT VRTRRKSDA
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