| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3428 |
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| Symbol | |
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| ID | 4023942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3812239 |
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| End bp | 3813348 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637963633 |
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| Product | glycine oxidase ThiO |
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| Protein accession | YP_570553 |
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| Protein GI | 91977894 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCAGA CGATCCAAGG CCAAGGCGGG GCCGATTCCG CCGCTCATCA AGCCGCAATT
GCACCTGTTG CGCCGGCCCC GGCTGACGCG ACCTTGACCG GCGCCAAGCC GGATCTGCGC
AAGGACGCGC CGGTCTCGGT GATCGGCGCC GGCATCGCCG GCGCCTGGCA GGCGCTGCTG
CTGGCGCGCG CCGGCCGGCA GGTGACGCTG TACGAGCGCG GCGACCGAGA GATGACCCAG
GCCACCAGCC ATTGGGCCGG CGGCATGCTC GCGCCCTATT GCGAAGCCGA GGCCGCCGAG
CCGATGGTCG GCCAGATGGG CCTGCGCTCG CTGGAAATGT GGCGCAAGGA ATTCCCGGAG
ACCGCGTTCA ACGGCTCGCT GGTCGTGGCC CATCCGCGCG ACCGCGCCGA TTTCGAACGC
TTCGCCAAGA TGACCGCGGG CCACCGGCGG CTCGACGCCG ATGGCGTCGC CGAGCTGGAG
CCTGCGCTCG CCGGCCGCTT CCGCGAGGGC CTGTACTTCC CCGACGAAGG CCATGTCGAG
CCGCGGCTGG TGTTGGCGCG GCTGCATGAG CGCCTCGTCG AGGCCGGCGG CGCGATCCAT
TTTGAATCCG AAATGACGCC GGAAGAACTC GACGGGCTGG TGATCGATTG CCGTGGTCTG
GCGGCCCGCG ACAAGGCGCC GGAGCTGCGC GGCGTCAAGG GCGAGATGGT GGTGATCAAG
ACCACCGAAG TGACGCTGTC GCGCCCGGTC CGGCTGATGC ACCCGCGCTG GCCGCTGTAT
GTCATCCCGC GCGAGAACAA TCACTTCATG CTGGGCGCGA CCTCGATCGA GAGCGAGGAC
GAACTCGTCA CGGTGCGCTC GGCGCTCGAA CTGCTCAGCG CCGCCTATGC GGTGCATCCG
GCGTTCGGCG AGGCGCATAT CGTCGAGATC GGCGCCGGGC TGCGCCCCGC TTTTCCCGAC
AATCTGCCGC GCATTTCCAT CGGCAACCGC CGCGTCGCGA CCAACGGCCT GTACCGCCAC
GGCTTCCTGA TGGCGCCGTC GCTCGCCGAG AAGGTGGTGG CCTATGTCGA GCGCGGCGAG
ATCGACAATC AGGTGATGCG ATGCTTGTGA
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| Protein sequence | MYQTIQGQGG ADSAAHQAAI APVAPAPADA TLTGAKPDLR KDAPVSVIGA GIAGAWQALL
LARAGRQVTL YERGDREMTQ ATSHWAGGML APYCEAEAAE PMVGQMGLRS LEMWRKEFPE
TAFNGSLVVA HPRDRADFER FAKMTAGHRR LDADGVAELE PALAGRFREG LYFPDEGHVE
PRLVLARLHE RLVEAGGAIH FESEMTPEEL DGLVIDCRGL AARDKAPELR GVKGEMVVIK
TTEVTLSRPV RLMHPRWPLY VIPRENNHFM LGATSIESED ELVTVRSALE LLSAAYAVHP
AFGEAHIVEI GAGLRPAFPD NLPRISIGNR RVATNGLYRH GFLMAPSLAE KVVAYVERGE
IDNQVMRCL
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