Gene RPD_3386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3386 
Symbol 
ID4023898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3760498 
End bp3762285 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content68% 
IMG OID637963591 
Productcell division protein FtsZ 
Protein accessionYP_570511 
Protein GI91977852 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0206] Cell division GTPase 
TIGRFAM ID[TIGR00065] cell division protein FtsZ
[TIGR03483] cell division protein FtsZ, alphaProteobacterial C-terminal extension 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.631027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0328355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA ATCTCAACGT TCCTGACATT CGCGAGCTGC GGCCCCGGAT CACCGTGTTC 
GGCGTCGGCG GCGCCGGCGG CAACGCGGTC AATAACATGA TCACCGCCGG CCTTGACGGC
GTGGATTTCG TCGTCGCCAA CACCGACGCG CAGGCGCTGA CGATGTCGAA GGCGCAGCGG
CTGGTGCAGA TGGGCACCCA GGTCACGCAG GGCCTCGGCG CCGGTTCGCA GCCCGATGTC
GGTTCTGCTG CAGCGCAGGA AGTCATTGAC GAGATTCGCG ATCATCTCAC CGGCGCGAAC
ATGGTATTCG TCACCGCCGG CATGGGCGGT GGCACCGGCA CCGGCGCAGC CCCAGTGATC
GCCAAAGCCG CGCGCGAGAT GGGCATCCTC ACCGTCGGCG TCGTGACCAA GCCGTTCCAT
TTCGAAGGCG CGCGCCGGAT GCGGACCGCT GAGTCCGGCA TCACCGAATT GCACAAGGTG
GTCGACACCT TGCTGATCAT CCCGAACCAG AATCTGTTCC GGGTCGCCAA CGAGAAGACC
ACCTTCGCTG ACGCCTTCTC GATGGCCGAC CAGGTGCTGT ATTCCGGCGT CGCCTGCATC
ACCGACCTGA TGGTCAAGGA AGGTCTGATC AATCTCGACT TCGCCGACGT CCGCGCCGTG
ATGCGCGAGA TGGGCAAGGC GATGATGGGC ACCGGCGAAG CCTCCGGCGA GAAGCGCGCG
CTGACCGCCG CGGAAGCCGC GATCGCCAAC CCCTTGATCG ACGATTCCTC GATGAAGGGC
GCCCGCGGCC TGCTGATCTC GATCACCGGC GGCAAGGATT TGACGCTGTT CGAGGTCGAC
GAAGCCGCCA CCCGCATCCG CGAGGAGGTC GATCAGGACG CCAACATCAT CGTCGGCGCC
ACCTTCGACG AGAGCCTCGA CGGCATCATC CGCGTCTCGG TCGTGGCGAC CGGCATCGAG
CAGGCGCAGT TGTCGCGTAA CGCAGCCGCA GCCGGCGCGG CGGCCAACGC TGCGCCGGCT
GACAGCCGTC TGGCTGAACT GACCGCCAAG CTGCGCGCCG ACAACCAGCG CATTGCCGAA
GCCGCCGCCG CCCGTGCAGG GCAGGCTGCC GCGCCGGTCT CGGCTGCCCC GGCAGCGCCG
CGCGCCGCCA ATGTCGAACG GGCTGCGCTC GCCGCGATTG CCGCCGCCGT CAGCAACGAG
CAGATGCCGG CTGCGGAAAT CGCCCAGGCT CCGGTTCAGC CGGCGTCCTA TGGCGACGTC
ACCGTTCGCG CGATCCCGCA GAAGCCGTCG CTGTTCCCGG ATTTCGACCA GTCCCGGTCG
GTCGCCGACG AGCAGGACGC TCCGGACTCC TTCATCCCGC AGCAGGCCGA ACGCGCCGCG
CTTCGCGCTC CGCGGATGCC GCGGTTCGAC GAACTCCCGG TTCCGGCCCA GAACGAGATC
CGTCAAGCCG CCCGCAGCGA GGCCGATGAC GAGCCGCAGA AGACTCGCCT GTCATTGTTG
CAGCGTCTGG CCAACGGGCT CAGCCGACGT GACGACGAAG CGGACCCGGC GGCCCCGATT
CGCGCTGCCG CAGCTCCCGC GGCGCCGCAA ATGCCGCCGC TACCGGAGCG CCGCCCGCAG
CGCAGCATTG CCGACCAAAT GGCCGGCCTC GACCCGGTTT CGGAATATGC CAAGCGTTCG
GCGCCGCAGG GTCTCGACAT GCATGGCCGC CCGGCGCCTG TTGCCCAAGC GCCACAGGGT
GACGACCATC TGGATATCCC CGCCTTCTTG CGGCGGCAGG CGAACTGA
 
Protein sequence
MTINLNVPDI RELRPRITVF GVGGAGGNAV NNMITAGLDG VDFVVANTDA QALTMSKAQR 
LVQMGTQVTQ GLGAGSQPDV GSAAAQEVID EIRDHLTGAN MVFVTAGMGG GTGTGAAPVI
AKAAREMGIL TVGVVTKPFH FEGARRMRTA ESGITELHKV VDTLLIIPNQ NLFRVANEKT
TFADAFSMAD QVLYSGVACI TDLMVKEGLI NLDFADVRAV MREMGKAMMG TGEASGEKRA
LTAAEAAIAN PLIDDSSMKG ARGLLISITG GKDLTLFEVD EAATRIREEV DQDANIIVGA
TFDESLDGII RVSVVATGIE QAQLSRNAAA AGAAANAAPA DSRLAELTAK LRADNQRIAE
AAAARAGQAA APVSAAPAAP RAANVERAAL AAIAAAVSNE QMPAAEIAQA PVQPASYGDV
TVRAIPQKPS LFPDFDQSRS VADEQDAPDS FIPQQAERAA LRAPRMPRFD ELPVPAQNEI
RQAARSEADD EPQKTRLSLL QRLANGLSRR DDEADPAAPI RAAAAPAAPQ MPPLPERRPQ
RSIADQMAGL DPVSEYAKRS APQGLDMHGR PAPVAQAPQG DDHLDIPAFL RRQAN