Gene RPD_3382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3382 
Symbol 
ID4023894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3755806 
End bp3756168 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content60% 
IMG OID637963587 
Productexcinuclease ABC subunit C 
Protein accessionYP_570507 
Protein GI91977848 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.114521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00379668 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAGTTTAC CGCGAGTCAT TCCGGGGCGC TTGCAAAGCA AGCGAACCCG GAATCTCGCC 
GCGCACGAGG CGCCGATGGC CTATTATGTC TATCTCCTCG CCAGTCGGAA AGACGGTCCG
CTGTATCTTG GCGTCACCAA CAACCTCGTC CGCAGGGTCT ACGAGCATCG CACCAAGGCG
GTCCCAGGCT TCACGTCGCG ATACAACATC ACGAAGCTGG TGTGGTTCGA AATCTACGAC
GACCCGATCT CCGCGATCAC GCGCGAGAAG GAGATCAAGA CGTGGCGGCG GGCGTGGAAG
GTGGCGTTGA TCGAACGAGA GAATCCGGGG TGGGAGGATC TGTACGACGG CATCGCGCAA
TGA
 
Protein sequence
MSLPRVIPGR LQSKRTRNLA AHEAPMAYYV YLLASRKDGP LYLGVTNNLV RRVYEHRTKA 
VPGFTSRYNI TKLVWFEIYD DPISAITREK EIKTWRRAWK VALIERENPG WEDLYDGIAQ