Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3334 |
Symbol | |
ID | 4023844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3694979 |
End bp | 3695668 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637963538 |
Product | putative hydroxylase |
Protein accession | YP_570459 |
Protein GI | 91977800 |
COG category | [S] Function unknown |
COG ID | [COG3128] Uncharacterized iron-regulated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0690816 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.437526 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGTTT GTATTCCCGA GATTCTGTCG AAACATGAGG TGACGGAATT CCGTCGCCTG ATGGACCAAG CGGACTGGGA GGATGGCCGC TCCACCGCCG GCGCGCAGTC GGCGATGGTC AAACGCAACG AGCAACTGCC GCCGGACAGC GAACTCGCCC GCATGCTCGG CCGCCGCATC GTGTCGGCCC TGACCGCCAA TCCGAAATTC GTCTCGGCGG CGGTGCCGTT GCAGATCTTC CCGCCGCTGT TCAACCGCTA TGCCGCGTCG GGCAATCACC ATTTCGGTAT TCACGTCGAT AATGCGGTGC GCGGCGACCC GCTCACCGGG CTGCGTATTC GCACCGACCT TTCAGTCACG CTGTTCCTCG CGGAGCCCGA TGAATATGAC GGCGGCGAGC TGGTGGTCGA GGACACCTAC GGGTCGCACG AGGTCAAGCT GCCGGCCGGG GACTGCGTTC TGTACCCGTC GTCCAGCCTG CACATGGTGA CGCCCGTGAC CCGCGGAGCG CGGGTCGCGT CTTTTTTCTG GTTGCAGAGC ATGATACGTG ATGCCCATGC GCGCAGCATG ATCTACGATC TCGACGGCGC CATTCAGGCT CTGGTCGAGC GGCTGGGACG CGATGACCCT GAAACGGTCA AATTGACCGG TATTTATCAC AACCTCATCC GGTACTGGGC CGACGTATGA
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Protein sequence | MLVCIPEILS KHEVTEFRRL MDQADWEDGR STAGAQSAMV KRNEQLPPDS ELARMLGRRI VSALTANPKF VSAAVPLQIF PPLFNRYAAS GNHHFGIHVD NAVRGDPLTG LRIRTDLSVT LFLAEPDEYD GGELVVEDTY GSHEVKLPAG DCVLYPSSSL HMVTPVTRGA RVASFFWLQS MIRDAHARSM IYDLDGAIQA LVERLGRDDP ETVKLTGIYH NLIRYWADV
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