| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3332 |
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| Symbol | |
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| ID | 4023842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3693642 |
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| End bp | 3694094 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637963536 |
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| Product | biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_570457 |
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| Protein GI | 91977798 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02803] TonB system transport protein ExbD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.156003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.605878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCGCCT CGCTCGGCGA TTTCGACGGT CTCGACGACG ATTTCGAAGA GACCCACGAG
ATCAATGTGA CGCCGTTCAT CGACGTCATT CTGGTGCTGC TGATCATCTT CATGGTCGCC
GCGCCGCTGT CGACCGTTGA TCTGCCGGTG AGCCTGCCGA CCTCGACGGC AACGCCGCAG
AAGCGGCCGG ACAAGCCGAC CTATGTCAGC ATCAAGTCCG ACCTCGCGGT GGCGATCGGC
GAGAACCAGG TCAAGCGCGT CGATCTGGTG CAGACTCTCG AGTCCATGCC GGACATGACC
AAGGATCGCT TCATCTTCCT GCGCGCCGAC CGCGCGGTGC CCTATGGCGA GCTGATGGAC
GTCCTGGAGA TGCTACGCGC CGGCGGCTAT GCCAAGATCA AGCTGGTGGC GCTCGAAGGG
GTGCCCGGGG CGACTCCGGG CGCCGCACAG TAA
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| Protein sequence | MGASLGDFDG LDDDFEETHE INVTPFIDVI LVLLIIFMVA APLSTVDLPV SLPTSTATPQ
KRPDKPTYVS IKSDLAVAIG ENQVKRVDLV QTLESMPDMT KDRFIFLRAD RAVPYGELMD
VLEMLRAGGY AKIKLVALEG VPGATPGAAQ
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