Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3314 |
Symbol | |
ID | 4023824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3670884 |
End bp | 3672098 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637963518 |
Product | thiolase |
Protein accession | YP_570439 |
Protein GI | 91977780 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTCCG GGCCCGCGCC AAGGGGCGCG TCCCGGAATG ACGGACGATG GGGTGATGCT AAGCGCCGGG CGCGCTTCAT GAGTTACATC TCCGGCACAG GCCTCACCCC GTTCGGCAAG ATCGAAGGCT CGACCACGCT GTCGCTGATG CGCGAGGCGG CCGAGCTGGC CGTCGCCGAC GCCGGGCTCG CGCGGAGCGA TATCGACGGG CTGCTGTGCG GCTATTCGAC GACGATGCCG CACATCATGC TGGCTACGGT GTTCGCCGAG CATTTCGGCA TCCGGCCGAG TTACTGCCAC GCGATACAGG TCGGCGGCGC CACCGGGATG GCAATGACGA TGCTGGCGCA TCAGCTCGTC GAAAGCGGCG CGGCGAAGAA CATCCTGGTT GTCGGCGGCG AGAACCGGCT GACCGGCCAG AGCCGCGACG CTTCCGTGCA GGCGCTGGCG CAGGTCGGCC ATCCGACTTA CGAAGTGCCG CTGGGGCCGA CCATTCCTGC GTATTACGGC CTGGTCGCGT CGCGCTACAT GCACGATCAC GGCGTCACCG AAGAGGACCT CGCCGAATTC GCGGTGCTGA TGCGCGCACA TGCGGCGACC CATCCCGGCG CGCAGTTTCG CGATTCCATC AGCGTCGCCG AGGTGATGGC GTCGAAGCCG ATTGCCTCGC CGCTGAAGCT GCTCGATTGC TGCCCGGTGT CGGACGGCGG CGCGGCGCTG GTGATCAGCG CCGAGCCGAC CACGGCGCAT CGCGTCAAGG TGCGCGGCTG CGCCCAGGCG CATACTCATC AGCACGTCAC CGCGATGCCG GCCGCGGGGC CATCGGGAGC GGAGCTTGCA GTGGAGCGGG CGAAAGCGGC GAGCGGTGTG GCGATCGGCG ATGTCCGCTA CGCCGCGGTC TATGACAGCT TCACCATCAC GCTGTTGATG CTACTCGAAG ACCTCGGCCT CGCCAAACGC GGCGAAGCCG CCGCGCAAGC GCGCAGTGGG AATTTCTCGC GCGCTGGCGT GATGCCCCTG AATACCCATG GCGGGCTGCT GAGCTACGGC CATTGCGGCG TCGGCGGCGC GATGGCGCAT CTGGTCGAGA CCCATCTGCA GATGACCGGT CGCGCCGGCG ATCGTCAGGT CCGCGACGCC TCGGTGGCGC TGCTGCACGG CGACGGCGGC GTGCTGTCGT CGCATGTCAG CATGTTTCTG GAGCGGGTGC GATGA
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Protein sequence | MDSGPAPRGA SRNDGRWGDA KRRARFMSYI SGTGLTPFGK IEGSTTLSLM REAAELAVAD AGLARSDIDG LLCGYSTTMP HIMLATVFAE HFGIRPSYCH AIQVGGATGM AMTMLAHQLV ESGAAKNILV VGGENRLTGQ SRDASVQALA QVGHPTYEVP LGPTIPAYYG LVASRYMHDH GVTEEDLAEF AVLMRAHAAT HPGAQFRDSI SVAEVMASKP IASPLKLLDC CPVSDGGAAL VISAEPTTAH RVKVRGCAQA HTHQHVTAMP AAGPSGAELA VERAKAASGV AIGDVRYAAV YDSFTITLLM LLEDLGLAKR GEAAAQARSG NFSRAGVMPL NTHGGLLSYG HCGVGGAMAH LVETHLQMTG RAGDRQVRDA SVALLHGDGG VLSSHVSMFL ERVR
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