| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3277 |
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| Symbol | |
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| ID | 4023786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3630616 |
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| End bp | 3633054 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963480 |
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| Product | ATP-binding region, ATPase-like |
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| Protein accession | YP_570402 |
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| Protein GI | 91977743 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.438196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00707292 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTCGGC CGGGAAGGAC TTGGGATGGA GCGACTTGGC ACCGATCACG ATTGCGTTGC
TACGTCGCCC CGCCAAAGCC CATCGCAGGA CATGTTGCAC GATCTGCTGT ACCAATCGTA
TCGAGCACCG TCCGCATTGC GGGCGGAGGC TTGGCCCAAA AGCGGATAGC GATGATTTCC
GAGAACCCCG AGGCATCGAT CCTTCGCGCG CTGATCAAAG CCGCACCCGA CGGTGTTCTC
CTGGTCGACC CTCAACAACG CATCGTGCTG TTCAATCAAG CCTGCGAAGA CCTGTTCGGT
TGGACGGCCC GCGAGGCGCT CGGCGAGGAA ATCGCCAAGC TGATCCCAGA CTGGCGCGAG
CTTTCCCGAA GCACGCACCG GTCCTCGGCG CTGGCGCGGC GCAAGGATGG AGCCTCCTTC
ACCATCGCGC TGTCGACGGC GCCCGTCCCG ACCGGGGATG CGGATTTCCA CGTCGTGCTG
GCGCGCAAAC GCGATGAGGA TGTTCTTCCG CGCGCCGACC GCAACGTCGA CGAACACAGC
TTCCGGCGAT TGGTCGAAGG CGTCACCGAC TATGCCATCT TCATGCTCGA TATCCACGGC
TGCGTCAGCA GCTGGAACCG CGGCGCCGAG CGGATCAAGC AATACACCGC CGCTGAAATC
CTCGGCCGGC ATTTCAGCGA GTTCTACCCG GAAGAGCAAC GCGCAAGCGG CGAGCCGGCG
CGGAACCTCG ACCTCGCGCG CGACAACGGC CGCTTCGAAA CCACCGGCTG GCGGCAGCGC
AAGGACGGCA GCCAGTTCTG GGCCCATGTG GTGCTCGAAC CGCTGCGCGA CGAGAACGGC
GCGCTGATCG GCTACGCCAA GGTGGCCACC GACATCACCG AACAGCGCCG CGCCGAGCAA
GTGATCCGCG AGGCGGATGC GCGCATCCAC ACGCTGATCG AGACGGTGGT CGACGGCGTT
ATCCTGAGCG ATCGGCTGGG CCGGATCCGA ACCTTCAACC TCGCCTGCCA CCGGCTGTTC
GGTTACGAGG CCGAGGACGT GATCGGCCGA CACATCTCGA TGCTGCTGCC GGCGACGAGC
GCCGATGAAG TGCACTCATT CTTCCGCCAC GGGGCGTACG CCGGCGAACA CGACCGGATC
GGCAGCGTTC GCGAAATGAC CGGACTGCGC CGCGACGGCC GGACTTTCCC GATGGATCTG
TCGATCGGCG AGACCATGCA GGACGGCGAG TCGGTATTCG TCGTGGTGGT CCACGACCTC
ACCGACCGCA AGCGGACCGA GGAACAGCTG GTCCAGGCGC AGAAGATGGA GACGGTCGGC
CAGCTTTCCG GCGGCATCGC GCACGACTTC AACAATCTGC TGACCGTGAT CGTCGGCAAC
GCCGAGTTTC TCGGCGATCA GCTCAAGGCG CGGCAGGATC TGCGCAGCCT CGCGCGGGAC
ATCAGCCGCG CCGGCCAGCG CGGCGCGGAA CTGACGCAGC GCCTGCTCGC CTTCAGCCGA
CGGCAGACGC TGAAGCCGGT CGAACTCGAT TGCAATGAAC TCGTGGATTC GATGCACAAG
CTGCTGCGGC CGACACTGCG GGAAGACATC GTGATCGACA CCGATCTCGA CCCCGGCCTG
CGCACCGCCT ATGCCGACCG CTCCCAGCTC GAATCCGCGA TCCTCAATCT CGCGCTCAAC
GCGCAGGACG CGATGCTCGG CGGCGGCAGG CTCAGCATCA CCACGTCGAA CGTCTCGCTC
GATGCCTCGT ACCAGGTCGT CAACCAGGAC GTCCGCCCGG GAGACTACGT GCTGGTCTCG
GTCACCGACA ACGGCTCGGG GATGCCGAGG GAGGTGCTCG AGCATGTGTT CGAACCGTTC
TACACGACCA AGGAAGTCGG CAAGGGTTCG GGCCTCGGGC TCAGCATGGT GTACGGCTTC
GTCAAGCAGT CGAACGGCCA CGTTTCTGTG TACAGCGAGC CCGGCCTCGG CACCACGGTG
CGGCTTTATC TGCCGGCCAT CGCGACCGGG CAGCCGGCAA GCGCCGAGAC CGCCGACGTG
ACCGAGCACC TGCCGTCGCG CGGCGAAGTC GTGCTGATCG TCGAGGATGA CCCGTTCGTC
CGCTCCTATG CGGTGATGTG CCTGCGCAGT CTCGGCTACA TCGTCATCGC CGCGATCGAC
GGCGCCGACG CGCTGCAGAC GCTCGATGGC GACGGCCACA TCGACGTGCT GTTCACCGAT
ATCGTGATGC CCGGCGGGAT CAGCGGATGG GAGCTCGCCG AGACCGCGAT GCTGAAGCGG
CCCGGCCTGC ACGTGCTGCT GACGTCGGGC TACGCGCTCG ACACCATCGC CGGTCGGAGC
CGCGGCGGCG GCCTGCCGGT CCTGAACAAG CCCTACCGCA AGGCCGATCT GGCGAGGCGA
CTGCGTGAGG TGATCGATAC GCCCAGATCG CAGCGCTGA
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| Protein sequence | MRRPGRTWDG ATWHRSRLRC YVAPPKPIAG HVARSAVPIV SSTVRIAGGG LAQKRIAMIS
ENPEASILRA LIKAAPDGVL LVDPQQRIVL FNQACEDLFG WTAREALGEE IAKLIPDWRE
LSRSTHRSSA LARRKDGASF TIALSTAPVP TGDADFHVVL ARKRDEDVLP RADRNVDEHS
FRRLVEGVTD YAIFMLDIHG CVSSWNRGAE RIKQYTAAEI LGRHFSEFYP EEQRASGEPA
RNLDLARDNG RFETTGWRQR KDGSQFWAHV VLEPLRDENG ALIGYAKVAT DITEQRRAEQ
VIREADARIH TLIETVVDGV ILSDRLGRIR TFNLACHRLF GYEAEDVIGR HISMLLPATS
ADEVHSFFRH GAYAGEHDRI GSVREMTGLR RDGRTFPMDL SIGETMQDGE SVFVVVVHDL
TDRKRTEEQL VQAQKMETVG QLSGGIAHDF NNLLTVIVGN AEFLGDQLKA RQDLRSLARD
ISRAGQRGAE LTQRLLAFSR RQTLKPVELD CNELVDSMHK LLRPTLREDI VIDTDLDPGL
RTAYADRSQL ESAILNLALN AQDAMLGGGR LSITTSNVSL DASYQVVNQD VRPGDYVLVS
VTDNGSGMPR EVLEHVFEPF YTTKEVGKGS GLGLSMVYGF VKQSNGHVSV YSEPGLGTTV
RLYLPAIATG QPASAETADV TEHLPSRGEV VLIVEDDPFV RSYAVMCLRS LGYIVIAAID
GADALQTLDG DGHIDVLFTD IVMPGGISGW ELAETAMLKR PGLHVLLTSG YALDTIAGRS
RGGGLPVLNK PYRKADLARR LREVIDTPRS QR
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