Gene RPD_3271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3271 
Symbol 
ID4023780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3626386 
End bp3626817 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content64% 
IMG OID637963474 
Productputative signal-transduction protein with CBS domains 
Protein accessionYP_570396 
Protein GI91977737 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00311988 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAGTGC GTGCAATTCT GGAATCCAAG GGCCGCTACA TCTACAGCGT CGAGCCGGAC 
GAGCGGCTGT CGGCCGCTGT GAAGACGTTG TCCGAGCGTC GTATCGGCGC GGTGCTGGTG
ATGCGCGGGA CGCGGCTCGA CGGCATCCTG TCGGAGCGCG ACATCGTGAA AGTGCTGGCC
GATCGCGGCG CCGCTGCGCT GGACGACCCG GTCCATGCGG TGATGACCCG CGATGTCGTG
AGTTGCGCGC AGAACGACAC GGTCGGCGAG ATCATGGAAG TGATGACGTC GCAAAAGTTC
CGGCATTTGC CGGTGCTCGA CGGCGACGAC CGCGTCGTCG GCCTGATTTC GATCGGCGAC
ATCGTGAAGT GGCGGCTGCG CGAATACGAG CACGAGCAAC AGGCGCTGCA CGACTACATC
AAATCGGCCT GA
 
Protein sequence
MTVRAILESK GRYIYSVEPD ERLSAAVKTL SERRIGAVLV MRGTRLDGIL SERDIVKVLA 
DRGAAALDDP VHAVMTRDVV SCAQNDTVGE IMEVMTSQKF RHLPVLDGDD RVVGLISIGD
IVKWRLREYE HEQQALHDYI KSA