| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3270 |
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| Symbol | |
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| ID | 4023779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3625039 |
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| End bp | 3626211 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637963473 |
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| Product | patatin |
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| Protein accession | YP_570395 |
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| Protein GI | 91977736 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00368888 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCACGAT TTTCCCCTAG TCCCGGCGTC CACAGGACTT CATGGTTCCG CAGCGCCCTG
GCAGGATCGC GCCATCGCGC TTTGGTGACC GTTGGGTTAG ACCGCGCAGA CTTCGCTGGT
GCGAGGAGCG AAGAGAATGA GGAGGCAGCC GTGCTGGACA ATTTGATCGG TCGTGGGCAG
AGCAGCCCGC CAGCACAGGG CAAGGTCGGC CTCGACAGCA TCCGCCGGCC GGTGATCGGG
CTGGCGCTCG GCGGCGGCGC GGCGCGCGGC TTCGCCCATA TCGGGATTTT GCGGACGCTG
CTCGGCGCCG GCATCACGCC CGACGTGGTG GTCGGCACCT CGATCGGCGC GGTGGTCGGC
GGCGCCTATG TGGCGGGCCA TCTCGACACG CTGGAAGAAT GGGCGCGCCA GCTTCAGCCG
CGCAACATTC TCGGCTATCT CGACATCCGC CTGAACGGCT CGGGCCTGAT CGGCGGCAGC
AAGCTCGCCG CCCAGCTCGA GGCGACGCTC GGCCAGACCC TGATCCAGGA CCTCAAGCAG
AAATTCGCCA GCGTCGCCAC CGAGGTGCGC ACCGGCCACG AGATCTGGCT GACGCATGGC
CGGATCGTCG ATGCGGTGCG GGCGTCCTAC GCCCTGCCCG GCATCTTCTC GCCGGTGCTG
ATCGGCGATC GCTGGCTGGT CGACGGCGCG CTGGTCAATC CGGTGCCGGT GTCGGCCGCC
CGCGCGCTCG GCGCCGAGAT CGTGATCGCC GCCAACGTCT CGAGCGACGT ATTCGGCCAC
GGCACCACGA TCTTCTCGCA CGGCGCGATC GAGGAAGTCA TCGAACCCGC CGCGGAGCCG
GCGGCGAAGC GCGGCTTCGG CCGGTTCTTC TCGCCGGAGC GCTTCGTCAA GCAGGAGATC
TTCGGCAGCG AAACCCGGCC GGGCATTTCC AAGGTGATGG TCGACGCTTT CAACATCATG
CAGGACCGCA TCACCCGGGC GCGGCTCGCC GGCGACCCGC CCGACATGCT GATCTCGCCG
CGGGTCGGCC GGATCGGCTG GTTCGACTTC CACCGCGCCG ACGAGATGAT CGCGCACGGC
GCCCGCGCCG CCGAACGCGC AATCGATTCG ATCCGCGAGG CGATCGAGGA GGTCGCGCCG
CAGGCGAAGG CGGATGTGCC GGTCGAGACG TGA
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| Protein sequence | MSRFSPSPGV HRTSWFRSAL AGSRHRALVT VGLDRADFAG ARSEENEEAA VLDNLIGRGQ
SSPPAQGKVG LDSIRRPVIG LALGGGAARG FAHIGILRTL LGAGITPDVV VGTSIGAVVG
GAYVAGHLDT LEEWARQLQP RNILGYLDIR LNGSGLIGGS KLAAQLEATL GQTLIQDLKQ
KFASVATEVR TGHEIWLTHG RIVDAVRASY ALPGIFSPVL IGDRWLVDGA LVNPVPVSAA
RALGAEIVIA ANVSSDVFGH GTTIFSHGAI EEVIEPAAEP AAKRGFGRFF SPERFVKQEI
FGSETRPGIS KVMVDAFNIM QDRITRARLA GDPPDMLISP RVGRIGWFDF HRADEMIAHG
ARAAERAIDS IREAIEEVAP QAKADVPVET
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