Gene RPD_3255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3255 
Symbol 
ID4023764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3610283 
End bp3611497 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content64% 
IMG OID637963458 
Producthypothetical protein 
Protein accessionYP_570380 
Protein GI91977721 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.217515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAG GGCTGGTTCG GATTGCGGTC GGGGTGGCGG CGGCGGCAGC GTTGGCGTGG 
TCGCCCGCCG TGGCGCAACA ACAGGGGCCG GTGCAGGTCG TTTCCGGAGT GTCCTACGAT
TACATCGATC GCTGGGACGT CGATCGGCTC AACAAGATCC TGACCACCGA CACCCCGCAA
TTCGCCGGCA TTCCGGTCAG CTACACGCCG GCGACCAACG CGGTGCGGCT GTATCGCGTG
ACCTATTCCT CGGTTGTCCC AGAGCGCGGC AACAGGCCGA TCAGCGCCAC CGGGCTGATC
GTCGTGCCAG AACTCGGTGG CGCGTCGTTC CCGATGGTGT CGTACCAGCA CGGCACGGTG
TACGACAAAC AGGAGGTGCC GTCGTTCCCG GACAAATCGC CCGAGACCGC GCTGATGATC
GCGCAATTCG CGGGGCAGGG CCATATCCTG ATCGGCGCTG ATTACTTCGG CATGGGCCAT
TCGACCGAGC CGGAAGGCTA CATGGTCAAG CAGAGCCATC AGCAGGCGAC CCACGACATG
CTGTCGGCGA GCCGCGCGGT GCTCGAACAC ATGAAACTGA GTGCGACGAA GCTGTTTCTC
GCGGGCTGGT CGCAGGGCGG CTTCGTCACT ATGGCGTTTC TCGAAAGGCT GGAGAACGCG
GGCGTGCCGG TCGCGGCCGC CGCGACGGCG AGCGCGCCGG TCGATGTTTT CGTCGCGTTG
AACGGCTTCC TGAGCTTCCC GCGCAAGAAC GATGCGAGCT GGGTGACGAC ACTGTTCATC
CTGTCGTCGT TTTCGTTCGA GAATTACTAC GGCGTCCCCG GATTGGCGCG CGCGCTGATC
ACCGAAGAGG CCTTCGAGAT TTCCCGCAAT GCCTATCTGC GCCAGCCCTA CGATGCCGCC
GATATCCCCA CCGATCTGCG CAAGCTGATC CGCGCCGAGT ATTTCGATCC GCAGTTTTTC
GCAGCGTCGG CCTATGGCCG GCTGGTCGCG GCCACCACGG CCTATCGCTG GATCGTCAAG
ACGCCGGTCC GCAATTACTA CGGCGAAAGC GACGAGGTCA TCAGCGTCCG CCTCGGCCGG
TTGGCGATGA CCTATCAGCG TGCGATCGGC CGCGGTAATC AGCAGGTCGA GGCGGTGTCG
ACCGGACCGA CTACGCATCG CGGCACCTTC GCCACCGCCG TTCCGCAATG GAAAACCTGG
TTCGACGGGC TGTAA
 
Protein sequence
MKTGLVRIAV GVAAAAALAW SPAVAQQQGP VQVVSGVSYD YIDRWDVDRL NKILTTDTPQ 
FAGIPVSYTP ATNAVRLYRV TYSSVVPERG NRPISATGLI VVPELGGASF PMVSYQHGTV
YDKQEVPSFP DKSPETALMI AQFAGQGHIL IGADYFGMGH STEPEGYMVK QSHQQATHDM
LSASRAVLEH MKLSATKLFL AGWSQGGFVT MAFLERLENA GVPVAAAATA SAPVDVFVAL
NGFLSFPRKN DASWVTTLFI LSSFSFENYY GVPGLARALI TEEAFEISRN AYLRQPYDAA
DIPTDLRKLI RAEYFDPQFF AASAYGRLVA ATTAYRWIVK TPVRNYYGES DEVISVRLGR
LAMTYQRAIG RGNQQVEAVS TGPTTHRGTF ATAVPQWKTW FDGL