Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3181 |
Symbol | rplB |
ID | 4023686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3524259 |
End bp | 3525095 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637963382 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_570308 |
Protein GI | 91977649 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTGA AGAAATACAA TCCTACGACG CCGGGCCAGC GCCAGCTGGT GTTGGTTGAT CGTTCGGCGC TCTACAAGGG CAAGCCGGTC AAGTCGCTCA CCGAGGGCAA GATCTCGAAC GGTGGTCGTA ACAACACCGG TCGGATCACC GTGCGGTTTC GCGGCGGCGG TCACAAGCAG ACCTATCGTA TCGTCGACTT CAAGCGCACC AAGGTCGACG TTCCGGCCAA GGTCGAGCGG CTGGAGTACG ATCCGAACCG CACCGCGTTC ATCGCGCTGA TCAAGTACGA GGACGGCGAG CAGGCCTACA TCCTGGCTCC GCAGCGTCTG TCGGTCGGCG ACAGCGTGAT CGCCGGTTCG TATGTCGACG TGAAGCCGGG TAACGTGATG CCGCTCGGCA ACATGCCGGT CGGCACCATC GTGCACAATA TCGAGCTGAA GATCGGGAAG GGCGGCCAGA TCGCCCGTTC CGCCGGCACT TACGCCCAGC TCGTCGGTCG CGACCATGAC TACGTGATCG TTCGCCTGAA TTCGGGCGAG CAGCGCCTGG TGCACGGCCG CTGCACCGCG ACCATCGGTG CGGTGTCGAA CCCGGACCAC ATGAACATCT CGATCGGCAA GGCTGGCCGT AAGCGCTGGC TCGGCCGTCG CCCGCACAAC CGCGGCGTCG TGATGAACCC GATCGACCAT CCGCACGGCG GTGGTGAAGG CCGCACCTCG GGCGGCCGCC ACCCGGTTAC TCCGTGGGGC AAGCCGACCA AGGGCAAGAA GACCCGCTCG AACAAGTCGA CCGACAAGTT CATTCTCATC AGCCGCCACA AGCGGAAGAA GAAGTAA
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Protein sequence | MALKKYNPTT PGQRQLVLVD RSALYKGKPV KSLTEGKISN GGRNNTGRIT VRFRGGGHKQ TYRIVDFKRT KVDVPAKVER LEYDPNRTAF IALIKYEDGE QAYILAPQRL SVGDSVIAGS YVDVKPGNVM PLGNMPVGTI VHNIELKIGK GGQIARSAGT YAQLVGRDHD YVIVRLNSGE QRLVHGRCTA TIGAVSNPDH MNISIGKAGR KRWLGRRPHN RGVVMNPIDH PHGGGEGRTS GGRHPVTPWG KPTKGKKTRS NKSTDKFILI SRHKRKKK
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