Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3177 |
Symbol | rplP |
ID | 4023682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3522403 |
End bp | 3522816 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637963378 |
Product | 50S ribosomal protein L16 |
Protein accession | YP_570304 |
Protein GI | 91977645 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0197] Ribosomal protein L16/L10E |
TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.943989 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCAAC CAAAGAAGAC CAAGTTCCGC AAGGCGCACA AGGGCCGCAT CCACGGCGTT GCGTCGTCGG GCGCGACTCT GGCGTTCGGC CAGTTCGGGT TGAAGGCGAT GGAGCCTGAG CGCGTCACCG CGCGCCAGAT CGAAGCCGCC CGTCGTGCGC TGACCCGCCA CATGAAGCGC GCCGGCCGCG TCTGGATCCG GATTTTCCCG GACGTTCCGG TGTCGAAGAA GCCGGCCGAA GTCCGCATGG GCTCCGGCAA GGGCGCGCCG GAATTGTGGG TCGCCCGCGT CAAGCCTGGC CGGGTGATGT TCGAGATCGA CGGCGTCAAC CAGCAGATCG CCCGCGAAGC GCTGACGCTG GCCGCCGCCA AGCTGCCGAT CAAGACGCGC TTCGTCGCGC GCATCGCGGA ATAG
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Protein sequence | MMQPKKTKFR KAHKGRIHGV ASSGATLAFG QFGLKAMEPE RVTARQIEAA RRALTRHMKR AGRVWIRIFP DVPVSKKPAE VRMGSGKGAP ELWVARVKPG RVMFEIDGVN QQIAREALTL AAAKLPIKTR FVARIAE
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