| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3169 |
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| Symbol | rplF |
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| ID | 4023674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3519223 |
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| End bp | 3519756 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637963370 |
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| Product | 50S ribosomal protein L6 |
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| Protein accession | YP_570296 |
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| Protein GI | 91977637 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.351306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.462877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCACGCG TTGGCAAGAA GCCCGTCACG GTCCCGTCCG GCGTGACGGC GACCGTCGAG
GGTCAGACCG TCAAGATGAA GGGACCGAAG GGTCAGCTTC AGTTCGTCGT GCACGACGAC
GTCGACGTCA AGTTCGAGGA CGGCTCGGTG AAGGTTGCGC CGCGGTTCGA GACGAATCGT
GCGCAGGCGT TGTATGGCAC CGCACGCGCA CAGATCGCGA ATCTGGTGGA CGGCGTCACC
AAGGGCTTCG AGAAGAAGCT CGAGATCACG GGCGTCGGCT ACCGCGCGTC ACTGCAGGGC
AAGAAGCTGC AGCTCGCGCT CGGCTACAGC CACGACGTGA TCTACGACAT CCCGGAAGGG
ATCACCATCA CGGTGCCGAA GCCGACCGAG ATCAACGTCG TCGGCATCGA CTCGCAGAAG
GTGGGCCAGG TGGCTGCGGA GATCCGCGAC TATCGTCCGC CGGAGCCCTA CAAGGGCAAG
GGTGTGCGCT ACTCTGACGA GTTCATCTTC CGCAAGGAAG GCAAGAAGAA GTAA
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| Protein sequence | MSRVGKKPVT VPSGVTATVE GQTVKMKGPK GQLQFVVHDD VDVKFEDGSV KVAPRFETNR
AQALYGTARA QIANLVDGVT KGFEKKLEIT GVGYRASLQG KKLQLALGYS HDVIYDIPEG
ITITVPKPTE INVVGIDSQK VGQVAAEIRD YRPPEPYKGK GVRYSDEFIF RKEGKKK
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