Gene RPD_3168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3168 
SymbolrplR 
ID4023673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3518849 
End bp3519211 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content67% 
IMG OID637963369 
Product50S ribosomal protein L18 
Protein accessionYP_570295 
Protein GI91977636 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID[TIGR00060] ribosomal protein L18, bacterial type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.411824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.450059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGT TGAATGTCAC GAATGCCCGG CGGAAGACTC GGGTCCGGAT CGCGCTGCGG 
CGCACCGCCA ACGGCCGTCC TCGGCTGTCG GTGTTCCGCT CGTCGAAGCA TATTTACGCC
CAGGTGATCG ACGATCTGAA GGGCGAGACG CTCGCTTCGG CTTCGTCGCT GGAGAAGTCG
CTGCGCGACG CCGGCAACAC CGGCGCGAAC ATCGACGCGG CCAAGGCGGT CGGCAAGCTG
CTCGCGGAGC GCGCGGTTCA GCAGGGCGTC AAGGAAGTCG TGTTCGATCG CGGCGGCTAC
CTGTATCACG GCCGCGTCAA GGCGCTGGCG GATGCGGCCC GCGAGAGCGG CCTGAGCTTC
TGA
 
Protein sequence
MSKLNVTNAR RKTRVRIALR RTANGRPRLS VFRSSKHIYA QVIDDLKGET LASASSLEKS 
LRDAGNTGAN IDAAKAVGKL LAERAVQQGV KEVVFDRGGY LYHGRVKALA DAARESGLSF