| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3164 |
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| Symbol | secY |
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| ID | 4023669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3515981 |
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| End bp | 3517312 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637963365 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_570291 |
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| Protein GI | 91977632 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0194839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.509442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTCTG CAGCGGAACA ATTAGCGGCA AACCTTAATT TTTCGGCGCT CGGCAAGGCC
GAGGAGCTCA AGAAGCGGAT CTGGTTCACG CTCGGCGCGC TGCTGGTCTA TCGACTCGGC
ACGTACATCC CGCTTCCCGG TATCGATCCG ACCGTCTGGG AACAGGTCTT CAAGTCGCAG
GCCGGCGGCA TTCTTGGCAT GTTCAACATG TTCGCTGGCG GTGGCATTCA CCGCATGGCG
ATCTTCGCGC TCAATATCAT GCCGTACATC TCGGCATCGA TCATCGTGCA GCTGCTGACC
ACGGTGTCGC CGCAGCTCGA GGCGCTGAAG AAAGAAGGCG AGTCCGGCCG CAAGACGCTG
AACCAGTACA CCCGCTATCT GACGGTGATC CTGGCTGCGT TCCAGTCCTA CGGCATTGCC
GTCGGCCTGC AGGGCGCCGG CAACGTGGTG TCGGAGCCCG GCGCCTTCTT CCTGCTGTCG
ACCGCGATCA CGCTGACCGG CGGCACCATG TTCCTGATGT GGCTTGGTGA ACAGATCACC
TCGCGCGGCA TCGGCAACGG TATCTCGCTG ATCATCCTCG CCGGCATCGT CGCCGAGCTG
CCCTCTGCGC TGGCCAACAT GCTCGAGCTC GGCCGTCAGG GCGCGCTGTC GACCGGTCTG
ATCCTGGTCG TGCTGGTGAT GGCCGTCGTC GTGATCGCCT TCATCGTGTT CATGGAGCGG
GCGCAGCGTC GGCTGCTGAT CCAGTATCCG AAGCGCCAGG TCGGCAACAA GATGTTCGAG
GGCCAGTCCT CGCATCTGCC GCTCAAGCTC AACACCTCGG GCGTGATCCC GCCGATCTTC
GCATCGTCGC TGCTGCTGCT GCCGACCACG ATCGCGAGCT TCAATTCCGG CACCGGCCCG
GATTGGTTCC AGTGGATCGT CACCCAGTTC GGGCACGGCC GTCCGCTGTT CCTGCTGTTC
TACATCGCGA TGATCGTGTT CTTCGCTTTC TTCTACACCG CGATCGTGTT CAACCCGACC
GAGACCGCGG ACAATTTGAA GAAGCACGGC GGCTTCATTC CGGGCATCCG TCCCGGCGAG
CGCACCGCCG AGTACATCGA CTTCGTACTG TCGCGCATCA CGGCGGTCGG CGCTATCTAT
CTGGCGATCG TCTGTCTTAT TCCGGAAGGT CTGATCTCTT ACGCCTCGGT GCCGTTCTAT
TTCGGCGGAA CCTCGCTTCT GATCGTGGTC AGCGTCACGA TGGATACTGT GGCCCAGGTC
CAGGGCTATC TGTTGGCGCA CCAGTATGAA GGCTTGATCC GGAAGTCGAA ACTAAGGGGC
CGTAAGAAAT GA
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| Protein sequence | MVSAAEQLAA NLNFSALGKA EELKKRIWFT LGALLVYRLG TYIPLPGIDP TVWEQVFKSQ
AGGILGMFNM FAGGGIHRMA IFALNIMPYI SASIIVQLLT TVSPQLEALK KEGESGRKTL
NQYTRYLTVI LAAFQSYGIA VGLQGAGNVV SEPGAFFLLS TAITLTGGTM FLMWLGEQIT
SRGIGNGISL IILAGIVAEL PSALANMLEL GRQGALSTGL ILVVLVMAVV VIAFIVFMER
AQRRLLIQYP KRQVGNKMFE GQSSHLPLKL NTSGVIPPIF ASSLLLLPTT IASFNSGTGP
DWFQWIVTQF GHGRPLFLLF YIAMIVFFAF FYTAIVFNPT ETADNLKKHG GFIPGIRPGE
RTAEYIDFVL SRITAVGAIY LAIVCLIPEG LISYASVPFY FGGTSLLIVV SVTMDTVAQV
QGYLLAHQYE GLIRKSKLRG RKK
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