| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3159 |
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| Symbol | rplQ |
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| ID | 4023664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3512148 |
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| End bp | 3512558 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637963360 |
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| Product | 50S ribosomal protein L17 |
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| Protein accession | YP_570286 |
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| Protein GI | 91977627 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0203] Ribosomal protein L17 |
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| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.286053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.4337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTCACG GCAAGGTTCA TCGGAAGCTC AACCGCACCG CCGAACACCG CAAGGCGATG
TTCGCCAATA TGTGCGCCGC GCTGATCAAG CACGAGCAGA TCGTCACCAC GCTGCCGAAG
GCCAAGGAAT TGCGGCCGAT CGTCGAGAAG CTGGTCACGC TCGGCAAGAA GGGCGGCCTC
GACAAGCGCC GCCAGGCGAT CAGCGAGATG CGCGACCTCG ATCAGGTCAG GAAGCTGTTC
GGCGTGCTGG CGCCCCGCTA CAAGGATCGC AACGGCGGCT ACACCCGCAT CATCAAGGCG
GGCTTCCGCT ACGGCGACAA CGCCCCGATG GCGGTGATCG AATTCGTCGA CCGCGACGAA
GACGCCAAGG GCAAGGACTC CGGTCCGACC CAGGAATCCG AAGCGGCGTA A
|
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| Protein sequence | MRHGKVHRKL NRTAEHRKAM FANMCAALIK HEQIVTTLPK AKELRPIVEK LVTLGKKGGL
DKRRQAISEM RDLDQVRKLF GVLAPRYKDR NGGYTRIIKA GFRYGDNAPM AVIEFVDRDE
DAKGKDSGPT QESEAA
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