Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3106 |
Symbol | |
ID | 4023611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3451593 |
End bp | 3452720 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637963307 |
Product | acyl-CoA dehydrogenase-like |
Protein accession | YP_570233 |
Protein GI | 91977574 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0271451 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCTCG ACGAACTCCA GACCCAGATC CGCGACGCTG CTCGCGACTT CGCCCGCGAG CGGCTGGCGC CCACCGCTGC GGCGCGCGAT GCCGCTCACT CCTTCCCAAG GGCCGAACTG ACCGAGATGG GCCAGCTCGG CTTTCTCGGC ATGTTGGTGC CGGAAGCCTA TGGCGGCTCC GACACCGGCA TGGTGGCCTA TACGCTCGCC TTGGAGGAGA TCGCCGCCGG TGACGGCGCC TGCTCCACGA TCGTCAGCGT GCATTCCTCC GTGGGCTGCA TGCCGATCCT GAAATTCGGC ACCGAAGAGC AGAAGCAGCG CTTTCTGCCC AAGCTCGCCA GCGGCGAATG GATCGGCGGC TTCGCGCTGA CCGAGCCGCA GGCCGGCTCC GACGCCTCGA ACCTGCGCAC CACGGCGCGG CGCGACGGCG ACCACTACGT GATCAACGGC GCAAAACAGT TCATCACCTC GGGCAAGAAT GGTCAGCTCA TCATCGTGTT CGCCGTCACC GATCCCGCAG CGGGAAAGAA GGGCATCACG GCCTTCATCG TGCCGACCGA TACGCCGGGC TTCGAGGTGG TGCGGGTGGA GCACAAGCTC GGCCAGCATT CCTCCGACAC CTGCCAGCTC GCCTTCAACG ACATGCGCCT GCCCGCCGAC CTCAGGCTCG GCGCCGAGGG GGAAGGGCTG AAGATCGCGC TGTCCAATCT GGAGGGCGGG CGCATCGGCA TCGCGTCGCA GGCGGTCGGC ATGGCGCGCG CCGCGTTCGA GGTTGCGCGC GACTACGCCC GCGAGCGCAT TACCTTCGGC AAGCCAATCA TCGAGCATCA GGCGGTGGCA TTTCGCCTCG CCGATATGGC CACTCGGATC GCGGCCGCGC GGCAGATGGT ACTGCACGCC GCCAGCCTGC GCGAGGCCGG GTTGCCCTGC CTCACCGAGG CTTCAATGGC CAAGCTGTTG GCATCGGAAG CTGCCGAAGC GGTGTGCTCG GCGGCGATCC AAACGCTGGG AGGCTACGGC TATTTGAACG ACTTCCCGCT CGAACGAATC TACCGCGATG TAAGGGTTTG TCAGATCTAT GAGGGCACCA GTGACGTGCA GCGCATCGTG ATTGCCCGGA ATTTGTGA
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Protein sequence | MILDELQTQI RDAARDFARE RLAPTAAARD AAHSFPRAEL TEMGQLGFLG MLVPEAYGGS DTGMVAYTLA LEEIAAGDGA CSTIVSVHSS VGCMPILKFG TEEQKQRFLP KLASGEWIGG FALTEPQAGS DASNLRTTAR RDGDHYVING AKQFITSGKN GQLIIVFAVT DPAAGKKGIT AFIVPTDTPG FEVVRVEHKL GQHSSDTCQL AFNDMRLPAD LRLGAEGEGL KIALSNLEGG RIGIASQAVG MARAAFEVAR DYARERITFG KPIIEHQAVA FRLADMATRI AAARQMVLHA ASLREAGLPC LTEASMAKLL ASEAAEAVCS AAIQTLGGYG YLNDFPLERI YRDVRVCQIY EGTSDVQRIV IARNL
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