Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3041 |
Symbol | |
ID | 4023544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3388051 |
End bp | 3389340 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637963240 |
Product | DNA polymerase IV |
Protein accession | YP_570168 |
Protein GI | 91977509 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.678009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.273789 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGAAG CGGGGCCGCC CGGGCCGCTG TGCTTCTGTC GCGACTGCCT CACCGATCTC GGGGCGGACG CGCGGCGCTG CAGCGCGTGC GGCTCTCCGC GACTGCTCCG CCATCCCGCG CTGTCGACGC TGACGCTCGC GCATATCGAC TGCGATGCGT TCTACGCGAC CGTCGAGAAG CGCGATAATC CCGACCTCGC CGACCGGCCG GTGATCATCG GCGGCGGCAG GCGCGGCGTC GTCTCGGCCG CCTGCTACAT CGCGCGCACC TTCGGCGTTC GCTCGGCGAT GCCGATGTTC AAGGCGCTGG CGCTGTGCCC CTCGGCTGCT GTCGTGCGCC CCGACATGGC GAAATACGTC CGCGTCGGCC GCGAGGTTCG CCAGGCGATG CTGCAACTCA CGCCGCTGGT CGAGCCGCTG TCGATCGATG AGGCGTTTCT CGATCTGTCC GGCACCGAGC GGATGCACGG CGCGATCGCC GCCAAGGTAT TGGCGCGGTT CGCCCGCGAC ACCGAACGCG ACATCGGCAT CACCGTGTCG GTGGGCCTGT CGTGCAACAA ATTCCTCGCC AAGATCGCCT CCGACCTCGA CAAGCCGCGC GGTTTCGCCA CGCTCGATCA GGACGATGCG AAGGCGATGC TGGGGCCCCG CCCCGTAAGC TTCATCTTCG GCGTCGGCCC CGCGACGGCG GCTCGGGTCG CTCAGTACGG CTTCCGCACC ATCGCCGATC TGCAGAAGGC CGACGAGATC GACCTGATGC GGCAGTTCGG CGACGAAGGA CGGCGACTGT GGCGGCTCGC CCGCGGCATC GACAATCGCA AGGTCGTGCC GGATCGCGGC GCCAAGTCGA TCTCCAATGA AACCACCTTC GAAACCGACA TCCGCGATCT GGAGACGCTG GAACGGATCC TGTGGCGACT GTCGGACAAG GTTTCGTCGC GGCTGAAAAG CGCCGGCCTC GCCGGTTCGA CCATCACGTT GAAACTGAAG TCGAGCGACT TTCGCCAGCG CACCCGCTCG CAGACGATTC ACGCGCCGAC TCAGCTCGCC AATCGCATTT TCGCGGTGTC GCGCGAGATG CTGGTCAAGG AAATCGACGG CACCGCCTTC CGCCTGATCG GCACCGGCGT CAGCGCGCTG ACCGAACAGG CACAGGCCGA CGAGACCGAC ATGCTGGATG CCCGCGCCGC GACAGCCGAG CGCGCGATCG ACGATCTGCG CAAGAAGTTC GGTGACGCCG CGGTGATCCG CGGCCTCGCC TATAACGGAC CGGACAAACC GCGGAGTTAG
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Protein sequence | MSEAGPPGPL CFCRDCLTDL GADARRCSAC GSPRLLRHPA LSTLTLAHID CDAFYATVEK RDNPDLADRP VIIGGGRRGV VSAACYIART FGVRSAMPMF KALALCPSAA VVRPDMAKYV RVGREVRQAM LQLTPLVEPL SIDEAFLDLS GTERMHGAIA AKVLARFARD TERDIGITVS VGLSCNKFLA KIASDLDKPR GFATLDQDDA KAMLGPRPVS FIFGVGPATA ARVAQYGFRT IADLQKADEI DLMRQFGDEG RRLWRLARGI DNRKVVPDRG AKSISNETTF ETDIRDLETL ERILWRLSDK VSSRLKSAGL AGSTITLKLK SSDFRQRTRS QTIHAPTQLA NRIFAVSREM LVKEIDGTAF RLIGTGVSAL TEQAQADETD MLDARAATAE RAIDDLRKKF GDAAVIRGLA YNGPDKPRS
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