| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3023 |
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| Symbol | |
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| ID | 4023526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3368197 |
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| End bp | 3368679 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637963222 |
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| Product | Holliday junction resolvase-like protein |
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| Protein accession | YP_570150 |
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| Protein GI | 91977491 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
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| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.438725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.394583 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCAC CCATTCTCCC GCTGATCGAA GCCGCCGCGC ACTGGCCCGC GCGCGGCGCG
CTGCTCGGCC TCGACCTCGG CACCAAGACG ATCGGAGTCG CAGTCTCCGA CCCCGATCGC
AAGCTCGCCA CCGGCATCGA AACCGTCGCG CGAACAGCCT TCACTGCCGA CGCCAAGCGT
GTGCTGGCGC TGGCGGCTGA GCGCAGCGCT TGCGGTTTCG TGCTCGGCCT GCCGCTGAAC
ATGGACGGCA GCGAAGGCCC GCGCGCGCAG TCGACCCGCG CTTTCGCCCG CAATTTTGCC
CGGCTCACCG AATTACCGAT CGGACTGTGG GACGAGCGGC TCTCGACCGC GGCGGTCGAG
CGCGCGCTGA TCGCCAATGA CGTCAGCCGC GCGAAACGGG CCAAGATCAT TGACGAACAC
GCCGCGATCT ACATTCTCCA AGGTGCGCTC GATCGGCTGG TGGCTTTGAA CCGCGCCGGG
TGA
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| Protein sequence | MPAPILPLIE AAAHWPARGA LLGLDLGTKT IGVAVSDPDR KLATGIETVA RTAFTADAKR
VLALAAERSA CGFVLGLPLN MDGSEGPRAQ STRAFARNFA RLTELPIGLW DERLSTAAVE
RALIANDVSR AKRAKIIDEH AAIYILQGAL DRLVALNRAG
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