Gene RPD_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3000 
Symbol 
ID4023503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3341569 
End bp3341913 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content61% 
IMG OID637963199 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_570127 
Protein GI91977468 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.242701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.55485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTGTTG AACAGGGCGC CGCCATTGGA CGTGTGGTCG TGGCGATCGA GCGGGTCGAA 
GAGACGTCAG CAGGTGGGCC AGAGTCCGAT CGGAGCGTCG CTTGCGGGCA GCCGATTAGG
GCGCTTCGTT TGATCGACAT CGCGCTATTG CCGGCGGCGC AGGGCCGCTG CATCGGGCGC
GAAGTTATCG CTGCGCTCGC CGTTGCCGCC CGATCGATCG AAGCGCGTCG GCTGACGCTG
TCAGTTCAGA TGTCAAATGA CCGAGCCCAA AGCTTGTACC GTCGCCTTGG CTTCATCGAC
ATGGGTGGTG AGGCGTATCG ACATATGATG ATGCCGCTAA CCTGA
 
Protein sequence
MIVEQGAAIG RVVVAIERVE ETSAGGPESD RSVACGQPIR ALRLIDIALL PAAQGRCIGR 
EVIAALAVAA RSIEARRLTL SVQMSNDRAQ SLYRRLGFID MGGEAYRHMM MPLT