Gene RPD_2958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2958 
Symbol 
ID4023461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3296352 
End bp3297098 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content63% 
IMG OID637963158 
Productcyclic nucleotide-binding 
Protein accessionYP_570086 
Protein GI91977427 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.369311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAACC GCGTTCTGGC GCAACTGCCG CCGGACGATT TTCTCGCCCT CAAGCCGATG 
TTGACGCCGG TCGAGTTCAA GGGACGAGCC GTGCTGCAGG AGGCCAACCG CCCTGTCGAG
TACGTGTACT TCATCGAGGA CGGCCTTGTT TCGCATATGG CCGGCAGTCG AACCGACTAC
GTCGAGACCG CCATGGTCGG CGTGTTCGGT TATGTCGGCG TTCCGCTGCT TCTCGGGAAT
CCGGTCGCTG CACAGCGCTC GATCGTTTCA GTGCCCGGAA CCGCGTTGCG GATCGAGGCA
GAGGATCTTT CGCGCGTGCT GACAACTCGG CCGCAGGTCC GCGACCAGCT GTTGCGCTAC
ATCTCGGCGC TGATCGCACA GAATACCCAG AGCGTGCTGT GCGCTGCCCG GCACGAAATT
AACCAGCGGT TGGCGCGCTG GTTGTTGCTC GCCAACGATC GCATTCAGAA TGACGTGCTC
TACATCACTC ACGAATTGCT GGCGACCAGC CTGGGCGTTC GCCGCGCCAG CATCACCAAT
GCGCTGTTGC ATTTCGAGGC CGAAGGCATT CTGCAAAAGT CGCGCGGCGC AGTGCGGGTG
ATCGACCGGC TCGGCCTCGA GAAGCGCGCC TGCGATTGCT ACAACATTGT CCGGGACGCC
TATGCGTGGG CGCAGGTCAC GCACGACGAC CACCATCACG CCGGATGCGC TCATGGGCAG
GACGGCATCA TCGCCGGCAC CGCCTGA
 
Protein sequence
MKNRVLAQLP PDDFLALKPM LTPVEFKGRA VLQEANRPVE YVYFIEDGLV SHMAGSRTDY 
VETAMVGVFG YVGVPLLLGN PVAAQRSIVS VPGTALRIEA EDLSRVLTTR PQVRDQLLRY
ISALIAQNTQ SVLCAARHEI NQRLARWLLL ANDRIQNDVL YITHELLATS LGVRRASITN
ALLHFEAEGI LQKSRGAVRV IDRLGLEKRA CDCYNIVRDA YAWAQVTHDD HHHAGCAHGQ
DGIIAGTA