| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2951 |
|---|
| Symbol | |
|---|
| ID | 4023454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 3288425 |
|---|
| End bp | 3289930 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637963151 |
|---|
| Product | Ppx/GppA phosphatase |
|---|
| Protein accession | YP_570079 |
|---|
| Protein GI | 91977420 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0248] Exopolyphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCAGGC AGGCGCGCAG GCGCGAAACC AGCGTCGCCG TGATCGATAT CGGCTCGAAT
TCGGTGCGTC TCGTGGTCTA CGAGTCGCTG GCGCGCAGCC TGATCACGGT TTTCAACGAA
AAGGCATTGT GCGGTCTCGG CCGTGAGGTG CAAAGCACCG GTCTGCTCGC GGCCGATGCC
GTCGACAAGG CGCTGACTGC GCTGCGGCGG TTCCGTGCGC TGATCCGGGT GATGAAGGTC
AGCCGGGTCT ACGCCATCGC CACCGCGGCC TGCCGCGACG CCAGCAACGG GCTGGAATTC
ATCGCGGCGG CCGAGCAGAT CTGCGGCGTG ACCATCGAAA TCTTGTCGGG GCCGCGCGAG
GCCAAGCTGT CGGCGCTCGG CGTGATCTCC GGCGTGCACA AGCCGAACGG CATCGTCGGC
GATCTTGGCG GCGGCTCGCT GGAATTGATC GATGTCCGCG GCAGTCAGGT TCGCAAGGGC
GTGACGCTGC CGCTCGGCAG CCTGGCGCTC CAGGACGCCT CGCAGAAATC ACTGAAGCGC
GCCGAGCGTA TCGCCAAGGA TGCGCTTGCG GGGGCGCTGC CGTTGAAGGC CGCGCGCGGG
CGATCTTTCT ACGCGGTCGG CGGCACCTGG CGCGCGCTCG CCCGCATTCA CATCGCGCAA
AGCGGCTACT CGCTCAAAGT GATGCACGGC TATTCGATAC CGGCGGCGGA AGCGCTCCGC
TTCGCCAAGC GGCTGCGCGT GCTGGCCTCG ACCGATCAAC TCGCCGATAT CGACCTCGTT
GCCGATGCAA GGCGTCCGTT GCTCGCCTAC GCGGCGCTGG TCCTCGAATA CGTCATCGAA
GCTTCCAAAC CGAAGACCAT CGTGTTCTCG ACCTACGGGG TCCGCGAGGG ATTGCTGTAC
GAGCAATTGC CGGTCGAAGA GCGCGCCAAG GACGGCCTGA TCTGCGCGGC ACAGGACCTC
AATGCGCTGC TGTCGCGCTC GGCGCGCCAC GCCGAGGAAC TGATCGGATG GACCGACCGG
TTGTTTCGCG TCGCCAAGGT GCGCGAGACC GAGGACGATC GACGGCTGCG CCGTGCTGCC
TGTCTGATGT CGGATATCGG TTGGCGGGTC CATCCCGATC ATCGCGGCGA GCAGACCCTG
GCGCTGATCG CCAACGGCAA TTTCGGCGAC GTGACCCACC AGGAACGCGC CTTCATGGCG
CTGTCGGTGT TCTATCGCTA TGCCGGATTC AGCGAGCAGA ACGAACCGCC GGGACCGGTC
CGCGAACTGG TGACGCCGGC GATGGACGAG CGCGCGCGGC TGCTCGGCGC CGCATTCCGG
GTCGCGCATC TGATCAGCGC GGCGCGGCCT GGCGTGCTGC CGGCGACGCA TTTCCGCAGC
AGTGGCCGTA AGCTTATGCT GGTGTTCGAA CACGAGCTGG TCGACCTGGT CGCCGACCGC
GTCGGCAGCC GCTTCAAGCA ACTCGGCCGG ATGGTCGGCC GCGCCGGGAC GATCGTGCGG
CGCTGA
|
|---|
| Protein sequence | MTRQARRRET SVAVIDIGSN SVRLVVYESL ARSLITVFNE KALCGLGREV QSTGLLAADA
VDKALTALRR FRALIRVMKV SRVYAIATAA CRDASNGLEF IAAAEQICGV TIEILSGPRE
AKLSALGVIS GVHKPNGIVG DLGGGSLELI DVRGSQVRKG VTLPLGSLAL QDASQKSLKR
AERIAKDALA GALPLKAARG RSFYAVGGTW RALARIHIAQ SGYSLKVMHG YSIPAAEALR
FAKRLRVLAS TDQLADIDLV ADARRPLLAY AALVLEYVIE ASKPKTIVFS TYGVREGLLY
EQLPVEERAK DGLICAAQDL NALLSRSARH AEELIGWTDR LFRVAKVRET EDDRRLRRAA
CLMSDIGWRV HPDHRGEQTL ALIANGNFGD VTHQERAFMA LSVFYRYAGF SEQNEPPGPV
RELVTPAMDE RARLLGAAFR VAHLISAARP GVLPATHFRS SGRKLMLVFE HELVDLVADR
VGSRFKQLGR MVGRAGTIVR R
|
|---|
| |