Gene RPD_2901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2901 
Symbol 
ID4023402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3233165 
End bp3234574 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content61% 
IMG OID637963102 
Productglutamine synthetase, type I 
Protein accessionYP_570030 
Protein GI91977371 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0513537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.111483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG CCAAAGAAGT CCTGAAATCC ATCAAGGACA ACGACGTGAA ATACGTCGAC 
CTCCGTTTCA CCGATCCGCG CGGCAAGTGG CAGCACGTCA CCTTCGACGT CTCGATGATC
GACGAAGAGA TCTTCGCCGA AGGCACGATG TTCGACGGTT CCTCGATCGC CGGCTGGAAG
GCGATCAACG AGTCCGACAT GATGCTGATG TTGGATCCGT CGACGGCCGT CATCGATCCG
TTCTTCGCCG AGACCACCAT GGTCATCACC TGCGACATTC TCGAGCCGTC GACCGGTGAA
CCCTACAACC GCGACCCGCG CGGCATCGCC AAGAAGGCCG AAGCCCAGGT CAAGGCGCTC
GGCATCGGCG ACACCGTGTT CGTCGGTCCG GAAGCCGAAT TCTTCGTGTT CGACGACGTC
CGCTATTCGG CGAACCCGTA CAACACCGGC TTCAAGCTGG ATTCGTCGGA ACTGCCGACC
AATTCCGACA CCGAATACGA GGGCGGCAAC CTCGGCCACC GCATCCGCAC CAAGGCCGGT
TACTTCCCGG TCCCGCCGCA GGACTCGGTG CAGGACATGC GCTCGGAAAT GCTCGGCGCG
ATGGCGCGGA TGGGCGTCAA GGTCGAGAAG CATCACCACG AAGTCGCTTC CGCCCAGCAC
GAGCTCGGCA TGAAGTTCGA CACCCTGACC CACATGGCCG ACCAGATGCA GATCTACAAG
TACTGCATCC ATCAGGTCGC CCATATCTAC GGCAAGACCG CGACCTTCAT GCCGAAGCCG
GTGTTCGGCG ACAACGGCTC GGGCATGCAT GTGCACCAGT CGATCTGGAA GGACGGCAAG
CCGATGTTCG CCGGCAACAA GTACGCCGAC CTGTCGGAGA CTTGCTTGCA CTACATCGGC
GGCATCATCA GCCACGCCAA GGCGATCAAC GCCTTCACCA ATCCGTCGAC CAACTCCTAC
AAGCGTCTGG TCCCGGGTTA TGAAGCCCCG GTGCTGCTGG CCTATTCGGC CCGCAACCGT
TCGGCTTCCT GCCGCATCCC CTACACCACC TCGCCGAAGG CCAAGCGCGT CGAAGTCCGC
TTCCCGGACC CGATGGCCAA TCCGTATCTC GCCTTCGCCG CGATGCTGAT GGCCGGCCTC
GACGGCATCA AGAACAAGAT CGATCCGGGT CCGGCGATGG ACAAGGACCT CTACGACCTG
CCGAAGGAAG AGCTGAAGTC GATCCCGACG GTTTGCGGCT CGCTCCGCGA AGCGCTCGAG
AGCCTCGACA AGGACCGCGC GTTCCTGAAG GCCGGCGGCG TGTTCGACGA CGACTTCATC
GACGCCTACA TCGAGCTGAA GATGACCGAA GTGATGCGTT TCGAAATGAC GCCGCACCCG
GTCGAGTTCG AGATGTACTA CTCGCAGTAA
 
Protein sequence
MTTAKEVLKS IKDNDVKYVD LRFTDPRGKW QHVTFDVSMI DEEIFAEGTM FDGSSIAGWK 
AINESDMMLM LDPSTAVIDP FFAETTMVIT CDILEPSTGE PYNRDPRGIA KKAEAQVKAL
GIGDTVFVGP EAEFFVFDDV RYSANPYNTG FKLDSSELPT NSDTEYEGGN LGHRIRTKAG
YFPVPPQDSV QDMRSEMLGA MARMGVKVEK HHHEVASAQH ELGMKFDTLT HMADQMQIYK
YCIHQVAHIY GKTATFMPKP VFGDNGSGMH VHQSIWKDGK PMFAGNKYAD LSETCLHYIG
GIISHAKAIN AFTNPSTNSY KRLVPGYEAP VLLAYSARNR SASCRIPYTT SPKAKRVEVR
FPDPMANPYL AFAAMLMAGL DGIKNKIDPG PAMDKDLYDL PKEELKSIPT VCGSLREALE
SLDKDRAFLK AGGVFDDDFI DAYIELKMTE VMRFEMTPHP VEFEMYYSQ