Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2814 |
Symbol | |
ID | 4023312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3135347 |
End bp | 3135961 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637963012 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_569943 |
Protein GI | 91977284 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0715917 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.713554 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAGTC CCGAGTTTCT CATCACCTCG TTGATCGTCG TCGCCTCACC CGGGACCGGC GCGCTGTATA CGGTGGCGGC CGGGCTCTCG CGCGGCTCGC GCGCCAGCGT CATTGCCGCG TTCGGCAGCA CGATCGGGAT CGTGCCTCAC ATGGCCGCGG CGATCCTCGG CCTCGCCGCC CTGCTCCACA CCAGCGCCGT GGCGTTCCAG ACCTTCAAAT ATCTCGGCGT CGCCTATCTG TTGTACATGG CGTGGAAGAC GCTCGGCGAG CGCGGGCCGC TCAGCATCGA GAAAGAGGTC GGCGCGCGCT CGGCGCTACA AATCACCGTG ACCGGCGTGC TGATCAACAT CCTCAATCCG AAGCTGTCGA TCTTCTTTCT CGCCTTCCTG CCGCAATTCG TCGCCGCCGA CGAAGCGCAC CCGCTGGGGC GGATGGTCGA ACTCAGCGGC ATCTTCATGC TGATGACGTT CGTCGTCTTC GCGATCTACG GATTGTTCGC CGCCTGGCTG CGCGACCATG TCATCACCCG GCCGAAGGTG CTGACCTGGA TGCGCCGCGG CTTCGCCGCC GCCTTCGTCG CGCTCGGCGC GAAACTGGCG ACGGCGGAGC GCTGA
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Protein sequence | MVSPEFLITS LIVVASPGTG ALYTVAAGLS RGSRASVIAA FGSTIGIVPH MAAAILGLAA LLHTSAVAFQ TFKYLGVAYL LYMAWKTLGE RGPLSIEKEV GARSALQITV TGVLINILNP KLSIFFLAFL PQFVAADEAH PLGRMVELSG IFMLMTFVVF AIYGLFAAWL RDHVITRPKV LTWMRRGFAA AFVALGAKLA TAER
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