Gene RPD_2814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2814 
Symbol 
ID4023312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3135347 
End bp3135961 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content66% 
IMG OID637963012 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_569943 
Protein GI91977284 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0715917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.713554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAGTC CCGAGTTTCT CATCACCTCG TTGATCGTCG TCGCCTCACC CGGGACCGGC 
GCGCTGTATA CGGTGGCGGC CGGGCTCTCG CGCGGCTCGC GCGCCAGCGT CATTGCCGCG
TTCGGCAGCA CGATCGGGAT CGTGCCTCAC ATGGCCGCGG CGATCCTCGG CCTCGCCGCC
CTGCTCCACA CCAGCGCCGT GGCGTTCCAG ACCTTCAAAT ATCTCGGCGT CGCCTATCTG
TTGTACATGG CGTGGAAGAC GCTCGGCGAG CGCGGGCCGC TCAGCATCGA GAAAGAGGTC
GGCGCGCGCT CGGCGCTACA AATCACCGTG ACCGGCGTGC TGATCAACAT CCTCAATCCG
AAGCTGTCGA TCTTCTTTCT CGCCTTCCTG CCGCAATTCG TCGCCGCCGA CGAAGCGCAC
CCGCTGGGGC GGATGGTCGA ACTCAGCGGC ATCTTCATGC TGATGACGTT CGTCGTCTTC
GCGATCTACG GATTGTTCGC CGCCTGGCTG CGCGACCATG TCATCACCCG GCCGAAGGTG
CTGACCTGGA TGCGCCGCGG CTTCGCCGCC GCCTTCGTCG CGCTCGGCGC GAAACTGGCG
ACGGCGGAGC GCTGA
 
Protein sequence
MVSPEFLITS LIVVASPGTG ALYTVAAGLS RGSRASVIAA FGSTIGIVPH MAAAILGLAA 
LLHTSAVAFQ TFKYLGVAYL LYMAWKTLGE RGPLSIEKEV GARSALQITV TGVLINILNP
KLSIFFLAFL PQFVAADEAH PLGRMVELSG IFMLMTFVVF AIYGLFAAWL RDHVITRPKV
LTWMRRGFAA AFVALGAKLA TAER