| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2802 |
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| Symbol | |
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| ID | 4023300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3120348 |
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| End bp | 3123476 |
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| Gene Length | 3129 bp |
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| Protein Length | 1042 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963000 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_569931 |
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| Protein GI | 91977272 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.749449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.186131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCT CGGAGCTGTG CATCCGCCGG CCAGTGATGA CCACGCTGAT CACGGCGTCG
ATCATCGTCT TCGGGATTTT CGGCTACCGC CTGCTGCCGG TCTCGGCGTT GCCGAAGGTG
GATTTCCCGA CCATCGCGGT GAGCGCGACG TTGCCCGGCG CCAGCGCCGA CACCATGGCG
GCTTCGGTCG CCGGCATCAT CGAGCGCCAG CTTTCGACCA TCGCCGGCAT TTCCTCGATG
TCGTCGAGTT CGTCGCAGGG CACCTCGGTC ATCACCATCC AGTTCGACCT CGGCCGCAAC
ATCGACGCCG CCGCGCTCGA CGTGCAGACC GCGCTGACGA TCGCGCAGCG GCGATTGCCG
ATCGAAATGA CCACGCCGCC CAGCTTCCGC AAAGTGAACC CGGCGGAGTT TCCGGTGCTG
TTCGTGGCGC TGAGCTCGTC GACGCTGCCG CTGTCGGCCG TCAACGAGTA TGGCGACATC
ACGATCGGGC AGGCGTTGTC GCAAATCCCG GGCGTCGCCC AGGTGGTGAT CTACGGCACG
CAGAAATTCG CGGTGCGGGT TCAGGCCGAT CCGGTTGCGG CGGCGGCCCG CGGGCTGTCG
CTCGAGGACA TCCGCACCGC GGTGTCGCGC GCTAACTCCT CGACGCCGGT CGGCACCATG
AGCGGGCCCA AGCAGGACAT CGCCCTGCAG GCCTCCGGCC AGATGGACAA GGCTGCGGAC
TATCGCCACG TCGTGGTGGC GTGGCGCAAC GGCTCCCCGG TGAAGCTCGA TGAAGTCGCC
AAGATCTACG ACAGCGTCGA GAACGACCGG CTCGCGACCT GGTTCAACGG CGAGCGCGCG
ATCGTGCTCG CGATCCAGAA GCAGCCCGAC GCCAACACCG TGGCCGTCGT CGATGGCGTC
CGCGCGATGC TGCCGTCGTT GCGGGCGCAG ATCCCGCCCT CGGTCGAGAT GAACGTGATG
ATGGACCGCT CGGTGTCGGT GCGCCAGGCG GTGTTCGACG TTCAGGAGAC GCTGGCGATC
GCCGTCGTCC TGGTGGTGAT GGTGATCTTC CTGTTCCTGC GCAAGGCCTC GGCGACCTTC
ATTCCGGCGC TCGCGGTGCC GATCTCGCTG CTCGGCACCT TCGCCGTGAT GTACATGCTC
GACTTCTCGA TCAACAACAT GACGCTGCTG GCGCTGACTC TGTCGGTCGG CTTCGTGGTC
GACGACGCCA TCGTCATGCT CGAGAACATC ATGCGCCACG TCGAGCACGG GATGCGGCCG
TTCGAGGCGG CGCTGAAGGG CGCTCGCGAG ATCGGCTTCA CCATCATCTC GATCACCTTC
TCGTTGATCG CAGTGTTCAT TCCGGTGTTG CTGATGGGCG GCATCGTCGG CCGCGTGTTC
CGCGAGTTCT CGGTGACGAT CGCGGTGGCG ATCCTGGTGT CGGGCTTCGT GTCGTTGACG
CTGACGCCGA TGCTGTGCGC CCGTATGCTG AAGGCGCACG ATCCGGCGAA GAAGGAGAAC
ATCATCCTGC GCGGCTTCGA GGCGATGTTC AGCGCCTGGC TGCGCGGCTA TGAATGGGCG
CTCGACCACG TCCTGGCGCA CAAATTCCTG ATGTTGCTGG TGACCTTCGC GACGCTCGGC
GGCACCATCT ATCTCTATAT GATCGTGCCG AAGGGGTTCT TTCCGCAGGA GGACACCGGC
TTCCTGATCG GCGTCACCGA GGCCGCGACC GACACCTCGT TCGAGGCGAT GAAGGACCGC
CAGCTCGCGC TGGTGCAGGT GCTGAAGAGC GATCCGGCGG TCGACTACAT CAACAGCACC
GTCGGCGCCG GCGGTCCCAA TCCCACAGCG AATTACGGCC GGCTGTTCAT CGCGCTGAAG
CCGATCAAGG AGCGTGACGA TGCCGCCAAG GTGATCGCCC GGTTGCGGCA GAAGGCCGGG
CAGGTCCCGG GAATGCAGGC GTTCTTCCAG AGCATCCAGA ACCTGTCGGT CGGCGGCCGC
ATCTCCAAGA GCCAGTATCA GTATGTGATG CAGAGCGGCG ACACGGAATC GCTGTACCGG
CTCGCGCCGG AGATGCGCGA CAAGATCGCC AAATTGCCGG GGCTGCTCGA CGTCACCACC
GACCTCTACA TCAAGAACCC GCAGATGACG GTCGAGATCG ACCGCGAAAA GGCGGCGGTC
TACGGCATCA CTGTCGATCA GGTGCGCAAC CAGCTCTACA ACGCCTACGG CTCGCGCCAG
GTCGGCACCA TCTACATGCC GTCGAACGAC TACCAGATCA TTCTCGAAGT GCAGCCGGAG
TTCCGCGGCG ATCCCAACGA CATTTCCAAG CTCTATCTGA AGACGGCCAA CAACCAGACG
ATCCCGATCG ACGCGGTGGC GAGGATGGTG CCGAGCGTCG GCCCGCTGCA GATCAATCAC
CAGGGCCAGC AGCCGGCGGT GACGATTTCG TTCAACCTTG CCGAGGGCCA GTCGCTCGGC
GCTGCGGTCG ACCGCATCAC GCAGATCGAG CAGGCCTCCA ATCTGCCGGT GACGATCGTG
ACCGGCTTCT CCGGCACCGC GCAGGTGTTT CAGGAAAGCC TGCGCGGGCA GGGCGTGCTG
ATCCTCGCCG CGGTGTTCGC GGCCTACGTT ATCCTCGGCA TTCTGTACGA GAGCTTCATC
CACCCGATCA CGATTATCTC CGGCCTGCCG TCGGCCGGCA TCGGCGCGAT CCTGACGCTG
ATGCTGTTCA ACATGGAGTT GTCGGTGATC GCGATGATCG GCATCGTGAT GCTGGTCGGC
ATCGTCAAGA AGAACGCGAT CATGATGGTC GATTTCGCGC TGGAGCGGCG GCGCGTCGGG
CTGTCCGCCG AGCACGCGAT CCGCGAGGCG GCGCTACTGC GGTTCCGGCC GATCATGATG
ACCACCTTCG CGGCGATCTT CGGCACGCTG CCGGTCGCGC TCGGCACAGG CGCCGGTGCC
GAGCTGCGTC AGCCGCTGGG CGTCGCCGTG GTCGGCGGCC TGTGCGTCTC GCAATTGCTG
ACGCTGTTCA TCACGCCGGT GATCTACATC TATCTCGACA AGATCGACCG GAAGCTGAAG
CGCCGGCTCG AGCCGCAGCT CGAGGAGCTG GCCGATGGCG AGCGGCGGCG CGCGGTCGCG
GCGGAGTAG
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| Protein sequence | MTLSELCIRR PVMTTLITAS IIVFGIFGYR LLPVSALPKV DFPTIAVSAT LPGASADTMA
ASVAGIIERQ LSTIAGISSM SSSSSQGTSV ITIQFDLGRN IDAAALDVQT ALTIAQRRLP
IEMTTPPSFR KVNPAEFPVL FVALSSSTLP LSAVNEYGDI TIGQALSQIP GVAQVVIYGT
QKFAVRVQAD PVAAAARGLS LEDIRTAVSR ANSSTPVGTM SGPKQDIALQ ASGQMDKAAD
YRHVVVAWRN GSPVKLDEVA KIYDSVENDR LATWFNGERA IVLAIQKQPD ANTVAVVDGV
RAMLPSLRAQ IPPSVEMNVM MDRSVSVRQA VFDVQETLAI AVVLVVMVIF LFLRKASATF
IPALAVPISL LGTFAVMYML DFSINNMTLL ALTLSVGFVV DDAIVMLENI MRHVEHGMRP
FEAALKGARE IGFTIISITF SLIAVFIPVL LMGGIVGRVF REFSVTIAVA ILVSGFVSLT
LTPMLCARML KAHDPAKKEN IILRGFEAMF SAWLRGYEWA LDHVLAHKFL MLLVTFATLG
GTIYLYMIVP KGFFPQEDTG FLIGVTEAAT DTSFEAMKDR QLALVQVLKS DPAVDYINST
VGAGGPNPTA NYGRLFIALK PIKERDDAAK VIARLRQKAG QVPGMQAFFQ SIQNLSVGGR
ISKSQYQYVM QSGDTESLYR LAPEMRDKIA KLPGLLDVTT DLYIKNPQMT VEIDREKAAV
YGITVDQVRN QLYNAYGSRQ VGTIYMPSND YQIILEVQPE FRGDPNDISK LYLKTANNQT
IPIDAVARMV PSVGPLQINH QGQQPAVTIS FNLAEGQSLG AAVDRITQIE QASNLPVTIV
TGFSGTAQVF QESLRGQGVL ILAAVFAAYV ILGILYESFI HPITIISGLP SAGIGAILTL
MLFNMELSVI AMIGIVMLVG IVKKNAIMMV DFALERRRVG LSAEHAIREA ALLRFRPIMM
TTFAAIFGTL PVALGTGAGA ELRQPLGVAV VGGLCVSQLL TLFITPVIYI YLDKIDRKLK
RRLEPQLEEL ADGERRRAVA AE
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