Gene RPD_2778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2778 
Symbol 
ID4023276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3095893 
End bp3096333 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content62% 
IMG OID637962976 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_569907 
Protein GI91977248 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.414643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.627651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGTTA CTCCTGCGTT TGCTCAGGCC GCTGCCGCCG GCGGCGACGC CAACAGCATG 
ATGATGTCGC TGCTGCCGTT CGCCCTGATC TTCGTCATCA TGTATTTCCT GATTCTTCGC
CCGCAGCAGC GCAAGGTGAA GGAGCACGCC GAGCTGGTGA AGAACATTCG CCGCGGCGAC
ACCATCATCA CGTCGGGCGG CCTGGTCGGC AAGGTCACCA AGGTGGTCGA CGACGACCAG
ATCGAGTTCG AAGTTGCTGA CGGCGTCCGC GTCCGGCAGA TGCGCCAGAT GATCACCGGC
GTTCGCACCA AGGGCGAGCC GGTCAAGGAC GTTCCCGAGA AGGGCAAGGG CAAGGGCAAG
GATGGCGAGG CCAAGACTGA GACGGCCAAG ACTGAAGCTT CCAAGACTGA AGCGTCCAAG
GACGACACCG CGTCGAGCTG A
 
Protein sequence
MFVTPAFAQA AAAGGDANSM MMSLLPFALI FVIMYFLILR PQQRKVKEHA ELVKNIRRGD 
TIITSGGLVG KVTKVVDDDQ IEFEVADGVR VRQMRQMITG VRTKGEPVKD VPEKGKGKGK
DGEAKTETAK TEASKTEASK DDTASS