| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2776 |
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| Symbol | secF |
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| ID | 4023274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3093116 |
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| End bp | 3094225 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637962974 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_569905 |
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| Protein GI | 91977246 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.686561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.719321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACATCGA CACAGTGGAT TTTGATCGGG CTGGGCGTGC TGATCGTGGC GCTGACAATC
GTCAGCATCA TGGACTGGCT GCCGTCGCTG CGGATCGTGC CCGACGATAC TCATTTTGAC
TTCACCCAGT TCCGCCGCAT CAGCTTTCCG ATCTCGGCGG TGCTGTCGAT CGCCGCGATC
ACGCTGTTCT TCACCCACGG GCTGAATTTC GGCATCGACT TCAAGGGCGG CACGTTGCTC
GAGGTCAGGG CGCATTCCGG CACGGCCGAT ATTCCCGGGA TGCGCGAGAC GCTCGGCAAG
CTCGGGCTCG GCGACGTCCA GCTCCAGCAG TTCGGCGGCC CCGCCGAAGT CCTGATCCGC
GTCGCTGAGC AGCCCGGCGG CGACGCCGCG CAGCAGGAGG CGGTGCAGAA GGTCCGCGGC
GCGCTCGGCA ATTCCGTCGA CTATCGCCGC GTCGAAGTCG TCGGCCCGCG AGTCTCCAGC
GAGCTTCTGG CCTACGGCAT GCTCGGCCTG ATGCTCGCGA TTCTCGGCAT TCTGGTCTAT
CTCTGGTTCA GGTTCGAATG GCAGTTCGCG CTCGGCGCGA TGATCGCCAA CGTCCACGAC
ATCGTGCTGA CGATCGGCTT CATGTCGATC AGCCAGGTCG ATTTCGATCT CACCAGCATC
GCGGCGCTGT TGACCATTCT CGGCTATTCG CTGAACGACA CCGTCGTGAT CTACGACCGT
ATCCGCGAGA TGCTGCGGCG CTACAAGAAG ATGCCGATGC CGCAGCTTCT CAACGAGTCG
ATCAACTCGA CGCTGTCGCG CTCGATCATC ACCCACGTCA CCGTGACGCT GGCGCTGTTC
GCGCTGCTGC TGTTCGGCGG CCATGCGATC CACTCCTTCA CCGCGGTGAT GATGTTCGGC
GTGGTGCTGG TCGGCACCTA CACCTCGATC TTCATCGCGG CGCCGATCCT GATCTATCTC
GGCGTCGGCA CCCACCGCAT GGATGAGCCG GACGACAAGC CGGCGAAGCC GGAGCCGGCC
GAAAAGCTCG AAAAGGTCGA GGCCGTCGCG GCGCTGCCGC CGCCGCCGGC TGAAAAGTCG
AAAAAGGCTG CGAAGTCCAG GAAGCGCTGA
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| Protein sequence | MTSTQWILIG LGVLIVALTI VSIMDWLPSL RIVPDDTHFD FTQFRRISFP ISAVLSIAAI
TLFFTHGLNF GIDFKGGTLL EVRAHSGTAD IPGMRETLGK LGLGDVQLQQ FGGPAEVLIR
VAEQPGGDAA QQEAVQKVRG ALGNSVDYRR VEVVGPRVSS ELLAYGMLGL MLAILGILVY
LWFRFEWQFA LGAMIANVHD IVLTIGFMSI SQVDFDLTSI AALLTILGYS LNDTVVIYDR
IREMLRRYKK MPMPQLLNES INSTLSRSII THVTVTLALF ALLLFGGHAI HSFTAVMMFG
VVLVGTYTSI FIAAPILIYL GVGTHRMDEP DDKPAKPEPA EKLEKVEAVA ALPPPPAEKS
KKAAKSRKR
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