Gene RPD_2756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2756 
Symbol 
ID4023254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3076065 
End bp3076790 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content63% 
IMG OID637962954 
Productputative outer membrane protein 
Protein accessionYP_569885 
Protein GI91977226 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAT TTTTGCTGGG TAGCGTTGCT CTGATTGCAT TGGGTGCGGC GCCGGCGATG 
GCTGCCGATC TCGCGGCTCG TCCGTACGCC AAGGCTCCGC CGATCATCGC CGCGGTCTAT
GACTGGTCGG GCTTCTACAT CGGCGCCAAC GGCGGTTGGG GCACCAGCCG CAAGAGCTGG
GATTTCTATA CAGTTGGCGG CTTGGCCGCT GAAGGCTCGC ACGACGCGTC CGGAGCGACC
GCCGGTGGCC AGATCGGCTA CAATTGGCAG GCTGGCAGCT GGGTGTTCGG TCTGGAAGCG
CAGGGCAACT GGGCCGACTT CAAAGGCTCG AACGTGACGC TTCTCGGGGG TCTTTTTGAC
AACCAGTCCC GGATCGACGC TTTCGGCCTG TTCACCGGCC GCGTCGGTTA CGCCTGGAAC
AACGCGCTGC TGTACGCCAA GGGCGGCGCT GCCGTGGTCA ACGACAAGTA CGACTTCATT
CGTCGCGCTG ATGGTTTCGT GACCGGCACG GCTTCGGAGA CCCGTTGGGG CGCGGCTGTC
GGCGCCGGCT TCGAATATGG CTTCACGCCG AACTGGTCGT TCGCGGTCGA GTACGATCAT
CTGTTCCTCG ACAAGAAGGA CGTGACCTTC ACGAACACGG CGGTCGAGCG GATCAAACAG
GACGCCGACA TCGTGACCGC CCGCATCAAC TATCGCTGGG GTGGCCCGGT CGTCGCGAGG
TACTGA
 
Protein sequence
MKKFLLGSVA LIALGAAPAM AADLAARPYA KAPPIIAAVY DWSGFYIGAN GGWGTSRKSW 
DFYTVGGLAA EGSHDASGAT AGGQIGYNWQ AGSWVFGLEA QGNWADFKGS NVTLLGGLFD
NQSRIDAFGL FTGRVGYAWN NALLYAKGGA AVVNDKYDFI RRADGFVTGT ASETRWGAAV
GAGFEYGFTP NWSFAVEYDH LFLDKKDVTF TNTAVERIKQ DADIVTARIN YRWGGPVVAR
Y