| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2750 |
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| Symbol | |
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| ID | 4023248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3070277 |
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| End bp | 3071590 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637962948 |
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| Product | beta-lactamase |
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| Protein accession | YP_569879 |
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| Protein GI | 91977220 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.106005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGAG GCGGCGGGTC TGAGGCCCGA CTGATCGGCC GCGCCGTGAT GCGTATCGGC
CAATCGATGT TGGCATCGGC GTGGCTGTCG ATCGCGCCTG CGGCGGCGGC TGATTGCATG
GCCGATGCGC CTTCGCCGCC GGCTCACCGG TTCGCACCGA TCAACGCCTT CTTCGATCAT
GAGGTCGCAA CCGGAAAACT GCCCGGCGCC GTGATATTGA TCCAGCAGCG CGGCAAGCCG
CCTTATCTGC AATGTTTCGG CGTTCGCGAC GTGACGCGCC ACAGCCCGAT GACGCCGGAT
ACGATCTTTG CGCTGCATTC GATGACTAAG CCGATCACCA GCGTCGCGGC GATGATGCTG
ATCGACGCCG GCAAGATCGC GCTGGATGAT CCGGTCTCGA AATTCATCCC GGCCTTCGCC
GACGTCGAGG TCGGCGTCGA ATCCATGGCG GACAATGGTA AGCCCGCGCT CGAGCGCGTC
GCCGCGAACC GGCCGGTGAC GATCGCGGAT CTGCTGCGGC ACACCTCCGG CATCACCTAC
AGCTATATCG GCGGCCCGTT GATCCGGCAG GCCTATCGGG ACGCCGACAT CTTCGCCGGC
GCGTTCGACA ACGCCGCCTT CGCCGAGCGG ATTGCGCGGC TTCCACTGGC GCGGCAACCC
GGCACGCTGT GGCGCTACGG CCATTCCACC GACGTGCTCG GGCGCGTCAT CGAGTCCGTC
TCGGGCCAGA CGCTGTATCA GTTCGAAAAG CAGCACATTT TCGATCCGCT CGGCATGACC
AGCACGAAAT ACGTCCTCGA CAGCGACGAC GAGCGCGCAA GGATGGCCGA GCCGCTGCCG
GGCGACACCG TCCTGGTCGT CTCCGAGCGC AAGCGCCGCG CCCATCCGGA GTGGCAGTCC
GGGGGCGGCG GCCTGGTCAC GACCATCACC GACTATGCGC GCTTCGCCCG AATGATCCTC
AACGACGGCG AATTCGACGG CAGGCGCTAT CTGAGCCCGG CGGCGTTCAA GGCGATGACG
ACAGACCAAA TCGGGCCCGA CTCGGGCGTC GCGCGCGACT ACTTCTATTT TCCCGGAGAC
GGGTTCGGTT TCGGTTTTGG CTTTGCGGTT CGTGTCGAAC CGGGCGCCGC GAAACCGCCG
CCGCCAGGCT CGATCGGCGA ACTGAAATGG GACGGCGGCA GCGGGACCTA TTTCGGCGTC
GATCGCAAGC GGGACCTGAT CTTCATCCTG ATGCAGCAGA CCGAGAGCGA GCGCGGGCGC
GTCGTGCCTG CGTTCAAGAA GCTGGTCTAC GACGCCTTGG TTGCGAGCGA CTGA
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| Protein sequence | MPRGGGSEAR LIGRAVMRIG QSMLASAWLS IAPAAAADCM ADAPSPPAHR FAPINAFFDH
EVATGKLPGA VILIQQRGKP PYLQCFGVRD VTRHSPMTPD TIFALHSMTK PITSVAAMML
IDAGKIALDD PVSKFIPAFA DVEVGVESMA DNGKPALERV AANRPVTIAD LLRHTSGITY
SYIGGPLIRQ AYRDADIFAG AFDNAAFAER IARLPLARQP GTLWRYGHST DVLGRVIESV
SGQTLYQFEK QHIFDPLGMT STKYVLDSDD ERARMAEPLP GDTVLVVSER KRRAHPEWQS
GGGGLVTTIT DYARFARMIL NDGEFDGRRY LSPAAFKAMT TDQIGPDSGV ARDYFYFPGD
GFGFGFGFAV RVEPGAAKPP PPGSIGELKW DGGSGTYFGV DRKRDLIFIL MQQTESERGR
VVPAFKKLVY DALVASD
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