Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2743 |
Symbol | |
ID | 4023241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3064417 |
End bp | 3066483 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637962942 |
Product | UvrD/REP helicase |
Protein accession | YP_569873 |
Protein GI | 91977214 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTCTGC CCGCAACCTA TCTCGACGGC CTCAATCCGG AACAGCGTTG CGCCGTCGAA CACGGCGTGG GTGCGGGTCC CTGCCCGCCG CTGCTGGTGA TCGCCGGCGC CGGTTCCGGC AAGACCAACA CGCTGGCGCA TCGCGTCGCG CATCTCGTCG TCAACGGCGC CGATCCGCAT CGCATTCTGC TGATGACGTT CTCGCGCCGC GCCGCCGCCG AGATGACGCG GCGTGTCGAG CGGATCGCGC GCCGCGTGAT GGGCGATGGC GCACGCGGAG GTTACGGCGC ACTGAGCTGG GCCGGAACGT TCCACGGCAT CGGCGCGCGG CTGCTGCGCG AACATGCCGA GCGCATCGGC CTCGATCCGG CCTTCACGAT TCACGACCGC GAGGACTCCG CCGACCTGAT GAATCTGGTC CGGCACGACC TCGGTTTCTC GAAGACGGAA AGCCGTTTCC CCGCCAAGGC GACCTGCCTG TCGATCTACT CGCGCTGCGT CAATGCCGGG CTGCCGCTCG ATCAGGTGCT CGGCGCGAAC TATCCGTGGT GCGCCGGCTG GGCTGCCGAG CTGAAGCAGT TGTTCGCCGG CTATGTCGAC GCCAAGCAGC GCCACAACGT GCTGGATTAC GATGATCTGC TGCTGTACTG GGCGCAGACC ATGACCGAGC CGGCGCTGGC CGACGAGATC GGCAGCCGGT TCGACCATGT GCTGGTCGAC GAATATCAAG ACACCAACGC GCTGCAGGCG TCGATCCTGC TGGGGCTCAA GCCCGAGGGC CGGGGCCTCA CCGTGGTCGG CGACGACGCG CAGTCGATCT ATTCGTTCCG CGCCGCCACC GTGCGCAACA TCCTCGACTT CCCGAAGGCG TTCAGCCCGC CGGCCCGCAT CGTCACGCTC GACCGCAATT ATCGGTCGAC GCAAGCCATC CTCGGCGCGG CGAACGGCGT GATCGATCTC GCCGCCGAGC GCTTCACCAA GAATCTCTGG ACCGACCGCG CCATCGGAGC GCGACCGCAG CTCGTCGGCG TGCGCGACGA GGCCGATCAG GCGCGCTATA TCGTCGAGCG CGTGCTCGAG CATCGCGAAA GCGGAACCAC GCTGAAGCAA CAGGCGGTGC TGTTTCGCAC CTCGTCGCAT TCCGCGCCGC TCGAACTCGA ACTGACCCGC CGCAACATTC CCTTCGTGAA GTTCGGCGGG TTGAAATTTC TCGACGCCGC GCACGTCAAG GACATGCTGG CGCTGCTACG CTTCGTGCAG AACCCGCGCG ACCGGGTCGC CGGCTTCCGG GTGATGCTGC TGATACCCGG CATCGGCCCC GCCTCGGCGC AGAAGGCGCT GGACGCCATC AGCGCCGCCG CCGATCCGCT CGCCGCGCTC GCCAATATCC CCTCACCGCC GCGCGCCGGC GCCGATTGGC GCGACTTCAT CGACGCGGTG CGCGAGTTGC GCGACGGCGT CGCCGGCTGG CCGGCGGAGA TCGAACGCGC GCGGCTGTGG TATGAGCCGC ATCTCGACCG GATTCACGAC GACGCCGCGA CGCGCCGTGC CGACCTGGTG CAGCTCGCGC AGATCGCCTC CGGCTATCCG TCGCGCGAGC GCTTCCTCAC CGAGCTGACG CTCGACCCGC CGGACGCGAC GTCCGATCAG GCTGGTGTGC CGCTGCTCGA CGAGGACTAT CTGATCCTGT CGACGATCCA TTCCGCCAAG GGCCAGGAAT GGAAGTCGGT GTTTGTGCTC AACGTTGTCG ACGGCTGTAT GCCGTCCGAT CTCGGCACCG GAACCTCCGC CGAAATCGAG GAAGAGCGCC GCCTGCTCTA TGTCGCGATG ACGCGGGCGC GCGACGATCT GCATCTCGTG GTGCCGCAGC GCTTCTTCAC GCACGGCCAG AATGCGATGG GCGATCGCCA CGTCTACGCC GCGCGCAGCC GCTTCATTCC CGACAGGCTG CTGACTTTGT TCGAGCGCGT GAGCTGGCCA CACGTCGCGC CATCCACCGC CGGCTATCCC ACCCGGCAAG CGCCGCCGAT CGATATCGGC GCGCGGATGC GCGGGATGTG GCGCTGA
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Protein sequence | MSLPATYLDG LNPEQRCAVE HGVGAGPCPP LLVIAGAGSG KTNTLAHRVA HLVVNGADPH RILLMTFSRR AAAEMTRRVE RIARRVMGDG ARGGYGALSW AGTFHGIGAR LLREHAERIG LDPAFTIHDR EDSADLMNLV RHDLGFSKTE SRFPAKATCL SIYSRCVNAG LPLDQVLGAN YPWCAGWAAE LKQLFAGYVD AKQRHNVLDY DDLLLYWAQT MTEPALADEI GSRFDHVLVD EYQDTNALQA SILLGLKPEG RGLTVVGDDA QSIYSFRAAT VRNILDFPKA FSPPARIVTL DRNYRSTQAI LGAANGVIDL AAERFTKNLW TDRAIGARPQ LVGVRDEADQ ARYIVERVLE HRESGTTLKQ QAVLFRTSSH SAPLELELTR RNIPFVKFGG LKFLDAAHVK DMLALLRFVQ NPRDRVAGFR VMLLIPGIGP ASAQKALDAI SAAADPLAAL ANIPSPPRAG ADWRDFIDAV RELRDGVAGW PAEIERARLW YEPHLDRIHD DAATRRADLV QLAQIASGYP SRERFLTELT LDPPDATSDQ AGVPLLDEDY LILSTIHSAK GQEWKSVFVL NVVDGCMPSD LGTGTSAEIE EERRLLYVAM TRARDDLHLV VPQRFFTHGQ NAMGDRHVYA ARSRFIPDRL LTLFERVSWP HVAPSTAGYP TRQAPPIDIG ARMRGMWR
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