Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2733 |
Symbol | |
ID | 4023231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3052493 |
End bp | 3053233 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637962932 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_569863 |
Protein GI | 91977204 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.187494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGT TTTTCGCGCC CAGGATGATC CTTGCCGTGG CGACCGCCGC CGCAGCACTG ATCGTCGCGA ACGGCGCCGG GCAGGCTCAG GAAAGGCTGT CCGACGCAGC CGCCTTGCTG GTGGTCTCGA CGCGGCCGGC CGCGCCTTCG GCCTTCGACG CGGTCAGCGT GTCGGCGCCG TGGGCGGCCA CCATCGAACA GGCCGCGGGC GAAAACGGCC TGCCGCCGGT CTTCCTGCGC AGGCTGCTCC ATCAGGAAAG CACGATGTTC AATCTGGCGG TGAGCCGCGC CGGCGCGATG GGTATTGCCC AGTTCATGCC GCGCACCGCT GCAGCGCGCG GCCTCGACGA CCCGTTCGAT CCGCAAAAGG CAATCCCCGC CGCCGCGCGC TATCTCAGCG ATCTGCGCCG TCAGTTCGGC AATCTTGGCC TCGCAGCCGC GGCTTACAAT GCAGGATCGG GGCGGGTCAG CGCGTGGCTG AGCGGCACGT CGGAATTGCC CGCCGAGACG CGGGCCTACG TGATGCGCAT TACCGGCTTC AGCGCCGAGG ATTGGGCTGC GAACAAGCCG GATGCTGCCG CGCTGCGGGC CGCGCCGCCA TCAGCGGCGA TCCCGCAGCT CCACGCGCTG AAGGCCGAAG CGGGACCAAA ACCGTCACCA AAGAAGAAGA CTACGGAAGC CGAACTCTGC GCCGCCGTGA GCACCGCAGC GCGCGCTTGC ATCCTTCAGA CCGTCTACTG A
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Protein sequence | MAKFFAPRMI LAVATAAAAL IVANGAGQAQ ERLSDAAALL VVSTRPAAPS AFDAVSVSAP WAATIEQAAG ENGLPPVFLR RLLHQESTMF NLAVSRAGAM GIAQFMPRTA AARGLDDPFD PQKAIPAAAR YLSDLRRQFG NLGLAAAAYN AGSGRVSAWL SGTSELPAET RAYVMRITGF SAEDWAANKP DAAALRAAPP SAAIPQLHAL KAEAGPKPSP KKKTTEAELC AAVSTAARAC ILQTVY
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